RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 C7orf65Q6ZTY9 151 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 WFDC11Q8NEX6 87 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 OR5D16Q8NGK9 328 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 ZNF418Q8TF45 676 aaPredicted RBP2.81□□□□□ -1.96
VRK1-203ENST00000555067 MRPS24Q96EL2 167 aaKnown RBP2.81□□□□□ -1.96
VRK1-203ENST00000555067 NIT2Q9NQR4 276 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 ERG28Q9UKR5 140 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 ADGRL1O94910 1474 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 TCOF1Q13428 1488 aaKnown RBP2.81□□□□□ -1.96
VRK1-203ENST00000555067 SHANK1Q9Y566 2161 aa2.81□□□□□ -1.96
VRK1-203ENST00000555067 OVOS2A0A0J9YW53 1432 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 OVOS2Q6IE36 1432 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 RTL9Q8NET4 1388 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 IGKV1D-42A0A075B6H8 117 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 TRBV27A0A0K0K1C4 114 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 OR51F1A6NGY5 319 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 MT-ND6P03923 174 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 IFNA4P05014 189 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 CTSDP07339 412 aaPredicted RBP2.8□□□□□ -1.96
VRK1-203ENST00000555067 ZNF90Q03938 601 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 OR5H6Q8NGV6 325 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 OR4K15Q8NH41 348 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 CALML5Q9NZT1 146 aa2.8□□□□□ -1.96
VRK1-203ENST00000555067 MYO5AQ9Y4I1 1855 aaKnown RBP2.79□□□□□ -1.96
VRK1-203ENST00000555067 FRMPD1Q5SYB0 1578 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 TRAV3A0A0B4J244 114 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 DLEU1O43261 78 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 CRYGSP22914 178 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 HINT1P49773 126 aaPredicted RBP2.79□□□□□ -1.96
VRK1-203ENST00000555067 AQP4P55087 323 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 RRAS2P62070 204 aaPredicted RBP2.79□□□□□ -1.96
VRK1-203ENST00000555067 NCS1P62166 190 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 KLRD1Q13241 179 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 NDUFA5Q16718 116 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 ZNF791Q3KP31 576 aaPredicted RBP2.79□□□□□ -1.96
VRK1-203ENST00000555067 AAED1Q7RTV5 226 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 DEFB128Q7Z7B8 93 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 OR5A2Q8NGI9 324 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 CMTM2Q8TAZ6 248 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 NAT14Q8WUY8 206 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 C1orf54Q8WWF1 131 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 PRELID3AQ96N28 172 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 C2orf88Q9BSF0 95 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 TNFSF18Q9UNG2 199 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 SBF1O95248 1867 aa2.79□□□□□ -1.96
VRK1-203ENST00000555067 FAM135BQ49AJ0 1406 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 TMSB15BA0A087X1C1 80 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 MUC21A0A0G2JKD1 596 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 MUC21A0A140T8X8 626 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 HMSDA8MTL9 139 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 A8MWV9 139 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 APOC1P02654 83 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 CTSGP08311 255 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 METTL15P1P0C7V9 234 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 S100A1P23297 94 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 TMEM258P61165 79 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 NEDD8Q15843 81 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 PRR9Q5T870 116 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 Q8IYB0 196 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 OR4C6Q8NH72 309 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 DEDD2Q8WXF8 326 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 TP53RKQ96S44 253 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 PKMYT1Q99640 499 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 RETNLBQ9BQ08 111 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 BANF2Q9H503 90 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 NHP2Q9NX24 153 aaKnown RBP2.78□□□□□ -1.96
VRK1-203ENST00000555067 PSORS1C2Q9UIG4 136 aa2.78□□□□□ -1.96
VRK1-203ENST00000555067 PTPRBP23467 1997 aa2.78□□□□□ -1.97
VRK1-203ENST00000555067 CDK5RAP2Q96SN8 1893 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 PTPRGP23470 1445 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 PRG4Q92954 1404 aaPredicted RBP2.77□□□□□ -1.97
VRK1-203ENST00000555067 CUL9Q8IWT3 2517 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 CCDC88CQ9P219 2028 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 IGLV10-54A0A075B6I4 117 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 TPST1O60507 370 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 ZNF705BP0CI00 300 aaPredicted RBP2.77□□□□□ -1.97
VRK1-203ENST00000555067 FOXA3P55318 350 aaPredicted RBP2.77□□□□□ -1.97
VRK1-203ENST00000555067 RPS25P62851 125 aaKnown RBP2.77□□□□□ -1.97
VRK1-203ENST00000555067 ESRGQ1W209 222 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 HSD17B12Q53GQ0 312 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 MORN4Q8NDC4 146 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 OR4S1Q8NGB4 309 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 DIRC1Q969H9 104 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 SYNJ1O43426 1573 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 ANAPC1Q9H1A4 1944 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 SLIT2O94813 1529 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 DLC1Q96QB1 1528 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 KDM5BQ9UGL1 1544 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 NISCHQ9Y2I1 1504 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 KIAA2026Q5HYC2 2103 aa2.77□□□□□ -1.97
VRK1-203ENST00000555067 FANCMQ8IYD8 2048 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 POLEQ07864 2286 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 A0A1W2PNN7 141 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 GNG7O60262 68 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 PMP2P02689 132 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 TCRAP04437 139 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 TSPAN19P0C672 248 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 IGLC6P0CF74 106 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 LINC00694P0DN24 101 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 ERHP84090 104 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms