RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 RPP25LQ8N5L8 163 aaKnown RBP7.69□□□□□ -1.18
SYNE2-215ENST00000554997 GLMPQ8WWB7 406 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 MRPL32Q9BYC8 188 aaKnown RBP7.69□□□□□ -1.18
SYNE2-215ENST00000554997 RPRMQ9NS64 109 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 FUT9Q9Y231 359 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 NBEAL1Q6ZS30 2694 aa7.69□□□□□ -1.18
SYNE2-215ENST00000554997 TRAV5A0A0B4J249 113 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 A0A1W2PPV4 95 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 ZNF785A8K8V0 405 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 UMAD1C9J7I0 102 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 TSPAN4O14817 238 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 RPL7P18124 248 aaKnown RBP7.68□□□□□ -1.18
SYNE2-215ENST00000554997 RAB2AP61019 212 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 PAFAH1B2P68402 229 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 AKR1C8PQ5T2L2 129 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 MORN5Q5VZ52 161 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 LEMD1Q68G75 181 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 SIGLEC15Q6ZMC9 328 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 TCF24Q7RTU0 167 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 PHYHIPLQ96FC7 376 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 SCRT1Q9BWW7 348 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 ACTR3CQ9C0K3 210 aaPredicted RBP7.68□□□□□ -1.18
SYNE2-215ENST00000554997 SLC25A22Q9H936 323 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 ZMAT5Q9UDW3 170 aaKnown RBP7.68□□□□□ -1.18
SYNE2-215ENST00000554997 SMAD5-AS1Q9Y6J3 95 aa7.68□□□□□ -1.18
SYNE2-215ENST00000554997 PKD1L1Q8TDX9 2849 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 GALR1P47211 349 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 RAB5CP51148 216 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 RPL11P62913 178 aaKnown RBP7.67□□□□□ -1.18
SYNE2-215ENST00000554997 SAMD5Q5TGI4 173 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 LCN12Q6JVE5 192 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 DPPA3Q6W0C5 159 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 MIR17HGQ75NE6 70 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 TMEM61Q8N0U2 210 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 STXBP6Q8NFX7 210 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 TMED6Q8WW62 240 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 FAM167A-AS1Q96KT0 104 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 TMEM14CQ9P0S9 112 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 SELENOKQ9Y6D0 94 aa7.67□□□□□ -1.18
SYNE2-215ENST00000554997 TRAV2A0A0B4J234 112 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 IZUMO1RA6ND01 250 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 G3V4G9 280 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 MRPS12O15235 138 aaKnown RBP7.66□□□□□ -1.18
SYNE2-215ENST00000554997 MEOX2P50222 304 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 TAS2R45P59539 299 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 EGFEM1PQ0D2K5 195 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 SPATA31B1PQ5VZV4 182 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 FAM122CQ6P4D5 195 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 RAB24Q969Q5 203 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 C17orf77Q96MU5 243 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 SPAG8Q99932 426 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-215ENST00000554997 SLC25A2Q9BXI2 301 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 MS4A6AQ9H2W1 248 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 OR51M1Q9H341 326 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 TRRAPQ9Y4A5 3859 aa7.66□□□□□ -1.18
SYNE2-215ENST00000554997 DNASE2O00115 360 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-215ENST00000554997 STAG3L2P0CL84 134 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 STAG3L3P0CL85 134 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 CDC34P49427 236 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-215ENST00000554997 SULT1A2P50226 295 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 CMC4P56277 68 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-215ENST00000554997 GUK1Q16774 197 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 BEAN1Q3B7T3 259 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 GBGT1Q8N5D6 347 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 MBD3L1Q8WWY6 194 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 HRH4Q9H3N8 390 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 NRN1Q9NPD7 142 aa7.65□□□□□ -1.18
SYNE2-215ENST00000554997 ZNF256Q9Y2P7 627 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-215ENST00000554997 IGKV3-7A0A075B6H7 116 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 A0A087X0K7 114 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 CTXND1A0A1B0GTU2 59 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 OR4C46A6NHA9 309 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 H3BQ15 152 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 K7EQG2 157 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 IGLC2P0DOY2 106 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 HIST1H1EP10412 219 aaKnown RBP7.64□□□□□ -1.19
SYNE2-215ENST00000554997 GP9P14770 177 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 ATF4P18848 351 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-215ENST00000554997 FHITP49789 147 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 KRTAP10-11P60412 298 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 ZNF726P1Q15940 193 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 GUCA2BQ16661 112 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 KHDC3LQ587J8 217 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 KPRPQ5T749 579 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-215ENST00000554997 SAMD13Q5VXD3 122 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 TEX261Q6UWH6 196 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 PQLC2Q6ZP29 291 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 DCANP1Q8TF63 244 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 RNF141Q8WVD5 230 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 ZNF503Q96F45 646 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 PAXXQ9BUH6 204 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 MGAM2Q2M2H8 2515 aa7.64□□□□□ -1.19
SYNE2-215ENST00000554997 TRBV19A0A075B6N1 114 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 HMGB3O15347 200 aaKnown RBP7.63□□□□□ -1.19
SYNE2-215ENST00000554997 OR7C2O60412 319 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 CXorf1O96002 111 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 H2AFB1P0C5Y9 115 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 NBEAP1P0C6P0 100 aa7.63□□□□□ -1.19
SYNE2-215ENST00000554997 PYYP10082 97 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms