RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 HMGB3O15347 200 aaKnown RBP10.97□□□□□ -0.65
SHOX2-206ENST00000554685 ZNF207O43670 478 aaKnown RBP10.97□□□□□ -0.65
SHOX2-206ENST00000554685 BUB3O43684 328 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 IFNA1P01562 189 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 PF4P02776 101 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 ARL14EPLP0DKL9 152 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 SSX7Q7RTT5 188 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 IQCF2Q8IXL9 164 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 OR8I2Q8N0Y5 310 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 C3orf56Q8N813 242 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 DUX3Q96PT4 197 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 PAXXQ9BUH6 204 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 SLC25A2Q9BXI2 301 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 OR51M1Q9H341 326 aa10.97□□□□□ -0.65
SHOX2-206ENST00000554685 TRAV5A0A0B4J249 113 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 OVOL1O14753 267 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 CD5P06127 495 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 GCHFRP30047 84 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 TAGLN2P37802 199 aaKnown RBP10.96□□□□□ -0.65
SHOX2-206ENST00000554685 GALR1P47211 349 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 FGF8P55075 233 aaPredicted RBP10.96□□□□□ -0.65
SHOX2-206ENST00000554685 UBE2L3P68036 154 aaKnown RBP10.96□□□□□ -0.65
SHOX2-206ENST00000554685 TM4SF20Q53R12 229 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 MORN5Q5VZ52 161 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 SHISA2Q6UWI4 295 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 OR9G4Q8NGQ1 327 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 PCNPQ8WW12 178 aaKnown RBP10.96□□□□□ -0.65
SHOX2-206ENST00000554685 DLX4Q92988 240 aaPredicted RBP10.96□□□□□ -0.65
SHOX2-206ENST00000554685 FAM167A-AS1Q96KT0 104 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 SMPXQ9UHP9 88 aa10.96□□□□□ -0.65
SHOX2-206ENST00000554685 TMEM213A2RRL7 107 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 HIST1H1EP10412 219 aaKnown RBP10.95□□□□□ -0.66
SHOX2-206ENST00000554685 GP9P14770 177 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 MEOX2P50222 304 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 PMS2P11Q13670 270 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 LEMD1Q68G75 181 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 HIST2H2BDQ6DRA6 164 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 C16orf54Q6UWD8 224 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 RHPN1-AS1Q9BWJ2 59 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 MANBALQ9NQG1 85 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 MED9Q9NWA0 146 aa10.95□□□□□ -0.66
SHOX2-206ENST00000554685 A0A1B0GV50 99 aa10.94□□□□□ -0.66
SHOX2-206ENST00000554685 HELTA6NFD8 242 aa10.94□□□□□ -0.66
SHOX2-206ENST00000554685 C2orf70A6NJV1 201 aa10.94□□□□□ -0.66
SHOX2-206ENST00000554685 CHEK1O14757 476 aa10.94□□□□□ -0.66
SHOX2-206ENST00000554685 ATF4P18848 351 aaPredicted RBP10.94□□□□□ -0.66
SHOX2-206ENST00000554685 NDUFA5Q16718 116 aa10.94□□□□□ -0.66
SHOX2-206ENST00000554685 GUK1Q16774 197 aa10.94□□□□□ -0.66
SHOX2-206ENST00000554685 ARL2-SNX15V9GYD0 113 aa10.94□□□□□ -0.66
SHOX2-206ENST00000554685 IGHV3-49A0A0A0MS15 119 aa10.93□□□□□ -0.66
SHOX2-206ENST00000554685 EIF3GO75821 320 aaKnown RBP eCLIP10.93□□□□□ -0.66
SHOX2-206ENST00000554685 FOLR2P14207 255 aa10.93□□□□□ -0.66
SHOX2-206ENST00000554685 CBLN1P23435 193 aa10.93□□□□□ -0.66
SHOX2-206ENST00000554685 SIGLEC15Q6ZMC9 328 aa10.93□□□□□ -0.66
SHOX2-206ENST00000554685 SUN5Q8TC36 379 aa10.93□□□□□ -0.66
SHOX2-206ENST00000554685 GLMPQ8WWB7 406 aa10.93□□□□□ -0.66
SHOX2-206ENST00000554685 GNG13Q9P2W3 67 aa10.93□□□□□ -0.66
SHOX2-206ENST00000554685 IGHV3OR16-13A0A075B7E8 117 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 A0A087X0K7 114 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 IGHV3-74A0A0B4J1X5 117 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 IGHV3-66A0A0C4DH42 116 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 LINC00862A6NCI5 91 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 ZNF785A8K8V0 405 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 APOHP02749 345 aaPredicted RBP10.92□□□□□ -0.66
SHOX2-206ENST00000554685 OR10J4P0C629 311 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 NBEAP1P0C6P0 100 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 PYYP10082 97 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 PDE6HQ13956 83 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 SAMD13Q5VXD3 122 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 DYNLRB2Q8TF09 96 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 FXYD5Q96DB9 178 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 ZNF503Q96F45 646 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 TXNDC17Q9BRA2 123 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
SHOX2-206ENST00000554685 RAB19A4D1S5 217 aa10.91□□□□□ -0.66
SHOX2-206ENST00000554685 MRPS12O15235 138 aaKnown RBP10.91□□□□□ -0.66
SHOX2-206ENST00000554685 IGLC2P0DOY2 106 aa10.91□□□□□ -0.66
SHOX2-206ENST00000554685 CCL20P78556 96 aa10.91□□□□□ -0.66
SHOX2-206ENST00000554685 FAM210AQ96ND0 272 aa10.91□□□□□ -0.66
SHOX2-206ENST00000554685 NKX6-2Q9C056 277 aaPredicted RBP10.91□□□□□ -0.66
SHOX2-206ENST00000554685 TMPRSS5Q9H3S3 457 aa10.91□□□□□ -0.66
SHOX2-206ENST00000554685 TRBV19A0A075B6N1 114 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 ZNF253O75346 499 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 CSN3P07498 182 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 BCL2P10415 239 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 RIPPLY3P57055 190 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 TCF24Q7RTU0 167 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 LYPD1Q8N2G4 141 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 SLC50A1Q9BRV3 221 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 VAX2Q9UIW0 290 aa10.9□□□□□ -0.66
SHOX2-206ENST00000554685 RBFOX3A6NFN3 312 aa10.89□□□□□ -0.67
SHOX2-206ENST00000554685 RPL11P62913 178 aaKnown RBP10.89□□□□□ -0.67
SHOX2-206ENST00000554685 PSG9Q00887 426 aa10.89□□□□□ -0.67
SHOX2-206ENST00000554685 PEA15Q15121 130 aa10.89□□□□□ -0.67
SHOX2-206ENST00000554685 COMMD7Q86VX2 200 aa10.89□□□□□ -0.67
SHOX2-206ENST00000554685 BLNKQ8WV28 456 aa10.89□□□□□ -0.67
SHOX2-206ENST00000554685 EIF5A2Q9GZV4 153 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms