RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 GPR82Q96P67 336 aa12.95□□□□□ -0.34
PPP4R3A-205ENST00000554684 A0A1B0GW64 132 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 PSMB11A5LHX3 300 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 PSG9Q00887 426 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 TWIST1Q15672 202 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 VN1R17PQ8TDU5 208 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 RNF5Q99942 180 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 CDX1P47902 265 aaPredicted RBP12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 PVRIGQ6DKI7 326 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 TEX38Q6PEX7 206 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 LINC00479Q96M42 142 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 JKAMPQ9P055 326 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 LINC00311Q8N616 119 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 DEFB112Q30KQ8 113 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 C1orf122Q6ZSJ8 110 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 DMXL1Q9Y485 3027 aa12.94□□□□□ -0.34
PPP4R3A-205ENST00000554684 PROP1O75360 226 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 IGFL4Q6B9Z1 124 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 TEP1Q99973 2627 aaKnown RBP12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 M0QZK8 103 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 EBLN2Q6P2I7 272 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 C10orf105Q8TEF2 133 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 OOSP1A8MZH6 123 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 TAS2R60P59551 318 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 C21orf62-AS1Q17RA5 79 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 SLC25A39Q9BZJ4 359 aaPredicted RBP12.93□□□□□ -0.34
PPP4R3A-205ENST00000554684 HOXA3O43365 443 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 OR5AL1P0C617 328 aa12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 DAZAP2Q15038 168 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 PRR31Q5SQ13 230 aa12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 PARD6GQ9BYG4 376 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 PAM16Q9Y3D7 125 aa12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 TRAV8-1A0A0A6YYK1 113 aa12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 RAB9AP51151 201 aa12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 TCF24Q7RTU0 167 aa12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 ATG101Q9BSB4 218 aa12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 USP24Q9UPU5 2620 aa12.92□□□□□ -0.34
PPP4R3A-205ENST00000554684 C11orf42Q8N5U0 333 aa12.91□□□□□ -0.34
PPP4R3A-205ENST00000554684 TRGV9Q99603 122 aa12.91□□□□□ -0.34
PPP4R3A-205ENST00000554684 EXPH5Q8NEV8 1989 aa12.91□□□□□ -0.34
PPP4R3A-205ENST00000554684 ID1P41134 155 aa12.91□□□□□ -0.34
PPP4R3A-205ENST00000554684 DTX2Q86UW9 622 aa12.91□□□□□ -0.34
PPP4R3A-205ENST00000554684 RITA1Q96K30 269 aa12.91□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIGD1CA8MV81 97 aa12.91□□□□□ -0.34
PPP4R3A-205ENST00000554684 COL5A1P20908 1838 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3A-205ENST00000554684 TCAPO15273 167 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BKO60814 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BJP06899 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 MGPP08493 103 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BOP23527 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BBP33778 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BDP58876 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BCP62807 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 BLCAPP62952 87 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST2H2BEQ16778 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 ZNF562Q6V9R5 426 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BHQ93079 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BNQ99877 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 HIST1H2BMQ99879 126 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 TBL2Q9Y4P3 447 aaKnown RBP12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 PKIAP61925 76 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 GCGP01275 180 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 POU2AF1Q16633 256 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 KLHL30-AS1Q8NEE0 82 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 DUX3Q96PT4 197 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 CHD6Q8TD26 2715 aa12.9□□□□□ -0.34
PPP4R3A-205ENST00000554684 TBX15Q96SF7 602 aa12.9□□□□□ -0.35
PPP4R3A-205ENST00000554684 A0A1B0GV90 55 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 M0R3E3 92 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 KRTAP10-9P60411 292 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 PAX8Q06710 450 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 FNDC4Q9H6D8 234 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 OTORQ9NRC9 128 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 FAM181BA6NEQ2 426 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 ASCL2Q99929 193 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 SAPCD1Q5SSQ6 148 aa12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 SSBP4Q9BWG4 385 aaPredicted RBP12.89□□□□□ -0.35
PPP4R3A-205ENST00000554684 A0A1W2PPR1 153 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 GPX1P07203 203 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 CKS2P33552 79 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 SPOCK3Q9BQ16 436 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 CENPVL3A0A0U1RRI6 287 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 DDTP30046 118 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 DDB2Q92466 427 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 OVOL3O00110 214 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 KLHDC1Q8N7A1 406 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 LINC00469Q8N7U9 141 aa12.88□□□□□ -0.35
PPP4R3A-205ENST00000554684 PRSS1P07477 247 aa12.87□□□□□ -0.35
PPP4R3A-205ENST00000554684 BRWD1-AS2P59051 145 aa12.87□□□□□ -0.35
PPP4R3A-205ENST00000554684 OR8A1Q8NGG7 326 aa12.87□□□□□ -0.35
PPP4R3A-205ENST00000554684 RPP21Q9H633 154 aaKnown RBP12.87□□□□□ -0.35
PPP4R3A-205ENST00000554684 SOX21Q9Y651 276 aaPredicted RBP12.87□□□□□ -0.35
PPP4R3A-205ENST00000554684 NDUFB8O95169 186 aa12.87□□□□□ -0.35
PPP4R3A-205ENST00000554684 HOXB4P17483 251 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms