RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 SMPXQ9UHP9 88 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 RFNGQ9Y644 331 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 U3KQE9 123 aa11.06□□□□□ -0.64
SHMT2-210ENST00000553950 IGHV3OR16-8A0A075B7F1 116 aa11.05□□□□□ -0.64
SHMT2-210ENST00000553950 ZNF207O43670 478 aaKnown RBP11.05□□□□□ -0.64
SHMT2-210ENST00000553950 TM4SF20Q53R12 229 aa11.05□□□□□ -0.64
SHMT2-210ENST00000553950 LINC00482Q8N8I6 264 aa11.05□□□□□ -0.64
SHMT2-210ENST00000553950 MBD3L1Q8WWY6 194 aa11.05□□□□□ -0.64
SHMT2-210ENST00000553950 GPR61Q9BZJ8 451 aa11.05□□□□□ -0.64
SHMT2-210ENST00000553950 TMEM167BQ9NRX6 74 aa11.05□□□□□ -0.64
SHMT2-210ENST00000553950 TRAV1-1A0A0B4J248 108 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 ATF4P18848 351 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-210ENST00000553950 CBLN1P23435 193 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 PSMB3P49720 205 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 UBE2L3P68036 154 aaKnown RBP11.04□□□□□ -0.64
SHMT2-210ENST00000553950 GUK1Q16774 197 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 C16orf54Q6UWD8 224 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 MIR17HGQ75NE6 70 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 PAXXQ9BUH6 204 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 RHPN1-AS1Q9BWJ2 59 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
SHMT2-210ENST00000553950 CHEK1O14757 476 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 IFNA1P01562 189 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 ARL14EPLP0DKL9 152 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 FOLR2P14207 255 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 TAGLN2P37802 199 aaKnown RBP11.03□□□□□ -0.64
SHMT2-210ENST00000553950 INSL3P51460 131 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 IFITM2Q01629 132 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 IL34Q6ZMJ4 242 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 OR2K2Q8NGT1 345 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 SFT2D1Q8WV19 159 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 GLMPQ8WWB7 406 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 OR51M1Q9H341 326 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 ARL2-SNX15V9GYD0 113 aa11.03□□□□□ -0.64
SHMT2-210ENST00000553950 A0A087X0K7 114 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 GP9P14770 177 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 CD33P20138 364 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 FHITP49789 147 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 PDE6HQ13956 83 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 ZNF726P1Q15940 193 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 SPATA31B1PQ5VZV4 182 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 IQCF2Q8IXL9 164 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 FAM167A-AS1Q96KT0 104 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
SHMT2-210ENST00000553950 TRAV25A0A0B4J276 109 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 ZNF253O75346 499 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 CSN3P07498 182 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 HIST1H1EP10412 219 aaKnown RBP11.01□□□□□ -0.65
SHMT2-210ENST00000553950 GCHFRP30047 84 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 CLLU1Q5K131 121 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 C9orf66Q5T8R8 295 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 MORN5Q5VZ52 161 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 LEMD1Q68G75 181 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 MANBALQ9NQG1 85 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 CLEC5AQ9NY25 188 aa11.01□□□□□ -0.65
SHMT2-210ENST00000553950 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 TRAV2A0A0B4J234 112 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 SAP30O75446 220 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 NMBP08949 121 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 SSX7Q7RTT5 188 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 TCF24Q7RTU0 167 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 LYPD6BQ8NI32 183 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 SLC50A1Q9BRV3 221 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 HRH4Q9H3N8 390 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 NRN1Q9NPD7 142 aa11□□□□□ -0.65
SHMT2-210ENST00000553950 IGHV3OR16-13A0A075B7E8 117 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 IGHV3-74A0A0B4J1X5 117 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 TRAV5A0A0B4J249 113 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 IGHV3-66A0A0C4DH42 116 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 ZNF785A8K8V0 405 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 HMGB3O15347 200 aaKnown RBP10.99□□□□□ -0.65
SHMT2-210ENST00000553950 APOHP02749 345 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-210ENST00000553950 IGLC2P0DOY2 106 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 PMS2P11Q13670 270 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 LCN12Q6JVE5 192 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 RBPMS2Q6ZRY4 209 aaKnown RBP10.99□□□□□ -0.65
SHMT2-210ENST00000553950 NKX6-2Q9C056 277 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-210ENST00000553950 COL6A5A8TX70 2615 aa10.99□□□□□ -0.65
SHMT2-210ENST00000553950 MRPS12O15235 138 aaKnown RBP10.98□□□□□ -0.65
SHMT2-210ENST00000553950 OR10J4P0C629 311 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 NBEAP1P0C6P0 100 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 PYYP10082 97 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 FGF8P55075 233 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-210ENST00000553950 RPL11P62913 178 aaKnown RBP10.98□□□□□ -0.65
SHMT2-210ENST00000553950 PSG9Q00887 426 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 WFDC9Q8NEX5 89 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 SUN5Q8TC36 379 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 FXYD5Q96DB9 178 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 SPAG8Q99932 426 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-210ENST00000553950 TXNDC17Q9BRA2 123 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 TCEAL7Q9BRU2 100 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 MLXQ9UH92 298 aa10.98□□□□□ -0.65
SHMT2-210ENST00000553950 TRBV19A0A075B6N1 114 aa10.97□□□□□ -0.65
SHMT2-210ENST00000553950 A0A1W2PRE2 83 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms