RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 CTSZQ9UBR2 303 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 FOXA2Q9Y261 457 aaPredicted RBP7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 A1L4Q6 167 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 TNFRSF13BO14836 293 aaPredicted RBP7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 CNIH1O95406 144 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 PLAUP00749 431 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 LIPFP07098 398 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 OPRK1P41145 380 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 TMPRSS3P57727 454 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 KLF5Q13887 457 aaPredicted RBP7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 ETDBQ3ZM63 59 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 GDF5OSQ5U4N7 250 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 H1FXQ92522 213 aaKnown RBP7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 C11orf52Q96A22 123 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 ZNF479Q96JC4 524 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 GGTLC1Q9BX51 225 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 TNCP24821 2201 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 WFDC2Q14508 124 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 EFNB3Q15768 340 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 POU2AF1Q16633 256 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 C5orf64Q2M2E5 130 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 SH2D6Q7Z4S9 175 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 NUP35Q8NFH5 326 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 ADTRPQ96IZ2 230 aa7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 MRPL20Q9BYC9 149 aaKnown RBP7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 MRPL16Q9NX20 251 aaKnown RBP7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 F11RQ9Y624 299 aaKnown RBP7.26□□□□□ -1.25
AL049839.2-201ENST00000553947 HIGD1CA8MV81 97 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 OR5AL1P0C617 328 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 SMIM13P0DJ93 91 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 ZNF137PP52743 207 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 MOB3BQ86TA1 216 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 ZNF714Q96N38 554 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 LSM4Q9Y4Z0 139 aaKnown RBP7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 POLEQ07864 2286 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 UPK2O00526 184 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 MPDU1O75352 247 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 GCSHP23434 173 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 GRNP28799 593 aaKnown RBP7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 HERV-K104P63124 156 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 ZNF833PQ6ZTB9 187 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 ZZEF1O43149 2961 aa7.25□□□□□ -1.25
AL049839.2-201ENST00000553947 CLEC3BP05452 202 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 SAA1P0DJI8 122 aaPredicted RBP7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 GATA3P23771 443 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 FCGR2BP31994 310 aaPredicted RBP7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 FAM120AOSQ5T036 256 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 TEX45Q8NA69 505 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 LINC01560Q8TB33 94 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 URB1-AS1Q96HZ7 61 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 DYNLRB1Q9NP97 96 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 RALYQ9UKM9 306 aaKnown RBP7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 ARFGEF3Q5TH69 2177 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 TEX50A0A1B0GTY4 177 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 LYNX1G3V0Z9 82 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 LYNX1P0DP58 116 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 LOXP28300 417 aaPredicted RBP7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 MLANAQ16655 118 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 MIR17HGQ75NE6 70 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 SPAG8Q99932 426 aaPredicted RBP7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 VKORC1Q9BQB6 163 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 C1RLQ9NZP8 487 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 E7EUB6 86 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 NDUFB3O43676 98 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 SPINK8P0C7L1 97 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 NMUP48645 174 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 DLX1P56177 255 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 TAS2R45P59539 299 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 RASL11AQ6T310 242 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 ARPC1AQ92747 370 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 CHCHD1Q96BP2 118 aaKnown RBP7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 LINC00479Q96M42 142 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 VGLL1Q99990 258 aa7.24□□□□□ -1.25
AL049839.2-201ENST00000553947 TMEM189A5PLL7 270 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 PRCDQ00LT1 54 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 PRB3Q04118 309 aaPredicted RBP7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 CDSNQ15517 529 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 TMEM30BQ3MIR4 351 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 RNF183Q96D59 192 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 SPATA25Q9BR10 227 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 ENY2Q9NPA8 101 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 PRNDQ9UKY0 176 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 RAXQ9Y2V3 346 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 MSRB2Q9Y3D2 182 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 IGF2RP11717 2491 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 FAM90A27PA6NNH2 459 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 AREGP15514 252 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 DLX6P56179 175 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 OR8A1Q8NGG7 326 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 TMEM167BQ9NRX6 74 aa7.23□□□□□ -1.25
AL049839.2-201ENST00000553947 DCHS2Q6V1P9 2916 aa7.22□□□□□ -1.25
AL049839.2-201ENST00000553947 IGKV1OR2-108A0A075B7D4 117 aa7.22□□□□□ -1.25
AL049839.2-201ENST00000553947 CHEK1O14757 476 aa7.22□□□□□ -1.25
AL049839.2-201ENST00000553947 TEPPQ6URK8 271 aa7.22□□□□□ -1.25
AL049839.2-201ENST00000553947 OR5AN1Q8NGI8 311 aa7.22□□□□□ -1.25
AL049839.2-201ENST00000553947 WIPF2Q8TF74 440 aaPredicted RBP7.22□□□□□ -1.25
AL049839.2-201ENST00000553947 HARBI1Q96MB7 349 aa7.22□□□□□ -1.25
AL049839.2-201ENST00000553947 NGBQ9NPG2 151 aa7.22□□□□□ -1.25
AL049839.2-201ENST00000553947 LRBAP50851 2863 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms