RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 OTORQ9NRC9 128 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 AURKAIP1Q9NWT8 199 aaPredicted RBP4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 GAR1Q9NY12 217 aaKnown RBP4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 C21orf62Q9NYP8 219 aa4.7□□□□□ -1.66
VIPAS39-204ENST00000553576 TRBV19A0A075B6N1 114 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 A0A0U1RQK1 487 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 SMIM27A0A1W2PRY6 76 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF320A2RRD8 509 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 B4DSR2 109 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 GNG7O60262 68 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 CTSGP08311 255 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 RNF224P0DH78 156 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 SMIM6P0DI80 62 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 IGLC2P0DOY2 106 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 SLC25A16P16260 332 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 RAB9AP51151 201 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 AKR1D1P51857 326 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 ERVFC1-1P60608 527 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 LYZP61626 148 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 RANP62826 216 aaKnown RBP4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 SRSF1Q07955 248 aaKnown RBP eCLIP4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 RPEL1Q2QD12 228 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 C19orf54Q5BKX5 351 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 KLF17Q5JT82 389 aaPredicted RBP4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 DNLZQ5SXM8 178 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 IBA57Q5T440 356 aaKnown RBP4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 RASL11AQ6T310 242 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 BAGE2Q86Y30 109 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 C5orf56Q8N8D9 126 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 FMC1Q96HJ9 113 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 BBC3Q96PG8 261 aaPredicted RBP4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 ATG101Q9BSB4 218 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 GNB1LQ9BYB4 327 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 PRSS22Q9GZN4 317 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 Q9H3A6 140 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF586Q9NXT0 402 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF580Q9UK33 172 aa4.69□□□□□ -1.66
VIPAS39-204ENST00000553576 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.69□□□□□ -1.662e-6■■■■□ 24
VIPAS39-204ENST00000553576 CR1P17927 2039 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 DOPEY1Q5JWR5 2465 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 IGHV4-30-2A0A087WSY4 118 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 A0A096LNT2 108 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 TRBV7-1A0A0A6YYK4 115 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 TRAV20A0A0B4J274 112 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 FAM231BA6NCW3 169 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 IFITM10A6NMD0 228 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 SLC17A3O00476 420 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF253O75346 499 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 FSHBP01225 129 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 LTAP01374 205 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 TCRAP04437 139 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 AMY1AP04745 511 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 IGF1P05019 195 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 SLC25A5P05141 298 aaKnown RBP4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 MSMBP08118 114 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 OR5I1Q13606 314 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 CT83Q5H943 113 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 UNQ5815/PRO19632Q6UWF5 114 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 COX8CQ7Z4L0 72 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 TMEM183AQ8IXX5 376 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 HIST3H2BBQ8N257 126 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 OR4F17Q8NGA8 305 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF502Q8TBZ5 544 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 WIPF2Q8TF74 440 aaPredicted RBP4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 BLNKQ8WV28 456 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 GRAMD2BQ96HH9 432 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF414Q96IQ9 312 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 LINC00479Q96M42 142 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 C12orf57Q99622 126 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 HSPB9Q9BQS6 159 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 ZNF492Q9P255 531 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 FBXL7Q9UJT9 491 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 MOB4Q9Y3A3 225 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 TRAPPC1Q9Y5R8 145 aa4.68□□□□□ -1.66
VIPAS39-204ENST00000553576 ACACBO00763 2458 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 SERTM2A0A1B0GWG4 89 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 C19orf71A6NCJ1 209 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 IZUMO1RA6ND01 250 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 A6NDX4 124 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 FBLL1A6NHQ2 334 aaKnown RBP4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 H3BUA1 57 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 J3QLI3 93 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 M0QZK8 103 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 ATP6V0E1O15342 81 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 GATCO43716 136 aaKnown RBP4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 OR2J3O76001 311 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 IGLV2-11P01706 119 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 IGHG2P01859 326 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 MT-ND6P03923 174 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 IL4P05112 153 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 COX6B1P14854 86 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 RPL7P18124 248 aaKnown RBP4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 FOXA3P55318 350 aaPredicted RBP4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 UBE2G1P62253 170 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 S100A12P80511 92 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 USF2Q15853 346 aaPredicted RBP4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 CLEC12BQ2HXU8 276 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 Q56UQ5 140 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 WDR73Q6P4I2 378 aa4.67□□□□□ -1.66
VIPAS39-204ENST00000553576 SIGLEC15Q6ZMC9 328 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms