RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 LOXL1Q08397 574 aaPredicted RBP16.3■□□□□ 0.2
RITA1-201ENST00000548278 NHLRC2Q8NBF2 726 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 OR4F17Q8NGA8 305 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 BTF3L4Q96K17 158 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 RNF24Q9Y225 148 aa16.3■□□□□ 0.2
RITA1-201ENST00000548278 CSPG4Q6UVK1 2322 aa16.29■□□□□ 0.2
RITA1-201ENST00000548278 PCP4L1A6NKN8 68 aa16.29■□□□□ 0.2
RITA1-201ENST00000548278 MGST1P10620 155 aaKnown RBP16.29■□□□□ 0.2
RITA1-201ENST00000548278 GPR183P32249 361 aa16.29■□□□□ 0.2
RITA1-201ENST00000548278 DEFB113Q30KQ7 82 aa16.29■□□□□ 0.2
RITA1-201ENST00000548278 MAPK1IP1LQ8NDC0 245 aa16.29■□□□□ 0.2
RITA1-201ENST00000548278 TCRAP04437 139 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 CCDC140Q96MF4 163 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 C17orf77Q96MU5 243 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 MS4A10Q96PG2 267 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 ZNF320A2RRD8 509 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 J3QLI3 93 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 CLEC3BP05452 202 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 EXOC3-AS1Q8N2X6 119 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 RPH3ALQ9UNE2 315 aa16.28■□□□□ 0.2
RITA1-201ENST00000548278 RNF223E7ERA6 249 aa16.27■□□□□ 0.2
RITA1-201ENST00000548278 IGF1P05019 195 aa16.27■□□□□ 0.2
RITA1-201ENST00000548278 NDUFA6P56556 154 aa16.27■□□□□ 0.2
RITA1-201ENST00000548278 UBE2G1P62253 170 aa16.27■□□□□ 0.2
RITA1-201ENST00000548278 C9orf152Q5JTZ5 239 aa16.27■□□□□ 0.2
RITA1-201ENST00000548278 LINC00527Q9UJ94 153 aa16.27■□□□□ 0.2
RITA1-201ENST00000548278 ABCA12Q86UK0 2595 aa16.27■□□□□ 0.19
RITA1-201ENST00000548278 TRAV9-1A0A075B6T8 112 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 TGFAP01135 160 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 ACTL10Q5JWF8 245 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 LRRC75A-AS1Q8N1F1 130 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 M0QZK8 103 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 IGHG2P01859 326 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 S100A9P06702 114 aaKnown RBP16.26■□□□□ 0.19
RITA1-201ENST00000548278 HOXA5P20719 270 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 RPEL1Q2QD12 228 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 IBA57Q5T440 356 aaKnown RBP16.26■□□□□ 0.19
RITA1-201ENST00000548278 SIGLEC15Q6ZMC9 328 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 TMEM190Q8WZ59 177 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 EEF1AKMT3Q96AZ1 226 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 FMC1Q96HJ9 113 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 SGK494Q96LW2 274 aa16.26■□□□□ 0.19
RITA1-201ENST00000548278 GAR1Q9NY12 217 aaKnown RBP16.26■□□□□ 0.19
RITA1-201ENST00000548278 RPL15P61313 204 aaKnown RBP16.25■□□□□ 0.19
RITA1-201ENST00000548278 LYPD1Q8N2G4 141 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 PITPNC1Q9UKF7 332 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 NAV2Q8IVL1 2488 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 CR1P17927 2039 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 TRBV7-1A0A0A6YYK4 115 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 TOMM20LQ6UXN7 152 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 CLEC19AQ6UXS0 136 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 SMIM12Q96EX1 92 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 GPR82Q96P67 336 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 RABAC1Q9UI14 185 aa16.25■□□□□ 0.19
RITA1-201ENST00000548278 IGHV3-35A0A0C4DH35 117 aa16.24■□□□□ 0.19
RITA1-201ENST00000548278 ATP5G2Q06055 141 aa16.24■□□□□ 0.19
RITA1-201ENST00000548278 FAM231DQ6ZW35 169 aa16.24■□□□□ 0.19
RITA1-201ENST00000548278 MLST8Q9BVC4 326 aa16.24■□□□□ 0.19
RITA1-201ENST00000548278 ZFAND3Q9H8U3 227 aa16.24■□□□□ 0.19
RITA1-201ENST00000548278 BMPR1BO00238 502 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 LTAP01374 205 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 IGHV4-31P0DP07 118 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 BLCAPP62952 87 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 Q5PR19 223 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 CMTM2Q8TAZ6 248 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 CHD6Q8TD26 2715 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 FAM223BA6NKX1 122 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 PDE6HQ13956 83 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 FAM223AQ8IWN6 122 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 LINC00469Q8N7U9 141 aa16.23■□□□□ 0.19
RITA1-201ENST00000548278 RPL7P18124 248 aaKnown RBP16.22■□□□□ 0.19
RITA1-201ENST00000548278 DEFB112Q30KQ8 113 aa16.22■□□□□ 0.19
RITA1-201ENST00000548278 IGHV3OR16-8A0A075B7F1 116 aa16.22■□□□□ 0.19
RITA1-201ENST00000548278 IGLV2-11P01706 119 aa16.22■□□□□ 0.19
RITA1-201ENST00000548278 PPIFP30405 207 aaKnown RBP16.22■□□□□ 0.19
RITA1-201ENST00000548278 Q6ZS46 218 aa16.22■□□□□ 0.19
RITA1-201ENST00000548278 GOLT1AQ6ZVE7 132 aa16.22■□□□□ 0.19
RITA1-201ENST00000548278 OR8I2Q8N0Y5 310 aa16.22■□□□□ 0.19
RITA1-201ENST00000548278 ATP6V0BQ99437 205 aa16.22■□□□□ 0.19
RITA1-201ENST00000548278 GNB4Q9HAV0 340 aa16.22■□□□□ 0.19
RITA1-201ENST00000548278 KMT2BQ9UMN6 2715 aaPredicted RBP16.21■□□□□ 0.19
RITA1-201ENST00000548278 ZNF705GA8MUZ8 300 aaPredicted RBP16.21■□□□□ 0.19
RITA1-201ENST00000548278 CDX1P47902 265 aaPredicted RBP16.21■□□□□ 0.19
RITA1-201ENST00000548278 NUDT10Q8NFP7 164 aa16.21■□□□□ 0.19
RITA1-201ENST00000548278 NUDT11Q96G61 164 aa16.21■□□□□ 0.19
RITA1-201ENST00000548278 NOL4LQ96MY1 436 aaPredicted RBP16.21■□□□□ 0.19
RITA1-201ENST00000548278 SERTAD4Q9NUC0 356 aa16.21■□□□□ 0.19
RITA1-201ENST00000548278 TRAV8-1A0A0A6YYK1 113 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 SMIM27A0A1W2PRY6 76 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 BRI3O95415 125 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 TRGV3P03979 118 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 MBD6Q96DN6 1003 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 TRAPPC1Q9Y5R8 145 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 IFITM10A6NMD0 228 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 S100A7P31151 101 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 Q86TA4 180 aa16.2■□□□□ 0.18
RITA1-201ENST00000548278 ZANQ9Y493 2812 aa16.19■□□□□ 0.18
RITA1-201ENST00000548278 TRBV6-1A0A0K0K1D8 114 aa16.19■□□□□ 0.18
RITA1-201ENST00000548278 CLPSL1A2RUU4 121 aa16.19■□□□□ 0.18
RITA1-201ENST00000548278 FSHBP01225 129 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms