RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 MAP1LC3BQ9GZQ8 125 aa12.07□□□□□ -0.48
TRAFD1-203ENST00000547063 C2orf70A6NJV1 201 aa12.06□□□□□ -0.48
TRAFD1-203ENST00000547063 OR7C2O60412 319 aa12.06□□□□□ -0.48
TRAFD1-203ENST00000547063 GALR1P47211 349 aa12.06□□□□□ -0.48
TRAFD1-203ENST00000547063 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
TRAFD1-203ENST00000547063 SPATA31B1PQ5VZV4 182 aa12.06□□□□□ -0.48
TRAFD1-203ENST00000547063 LCN15Q6UWW0 184 aa12.06□□□□□ -0.48
TRAFD1-203ENST00000547063 RHPN1-AS1Q9BWJ2 59 aa12.06□□□□□ -0.48
TRAFD1-203ENST00000547063 TMEM14CQ9P0S9 112 aa12.06□□□□□ -0.48
TRAFD1-203ENST00000547063 HELTA6NFD8 242 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 CBLN1P23435 193 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 MEOX2P50222 304 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 PPT1P50897 306 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 MORN5Q5VZ52 161 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 C16orf54Q6UWD8 224 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 IL34Q6ZMJ4 242 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 FAM167A-AS1Q96KT0 104 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 PAXXQ9BUH6 204 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 SLC25A2Q9BXI2 301 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 OR51M1Q9H341 326 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 SIGLEC8Q9NYZ4 499 aa12.05□□□□□ -0.48
TRAFD1-203ENST00000547063 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 CHEK1O14757 476 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 HMGB3O15347 200 aaKnown RBP12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 NMBP08949 121 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 ARL14EPLP0DKL9 152 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 FOLR2P14207 255 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 PSMB3P49720 205 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 CLLU1Q5K131 121 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 LEMD1Q68G75 181 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 LINC00482Q8N8I6 264 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 TMEM167BQ9NRX6 74 aa12.04□□□□□ -0.48
TRAFD1-203ENST00000547063 IGHV3-49A0A0A0MS15 119 aa12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 APOHP02749 345 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 CSN3P07498 182 aa12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 ATF4P18848 351 aaPredicted RBP12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 GUK1Q16774 197 aa12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 SIGLEC15Q6ZMC9 328 aa12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 SSX7Q7RTT5 188 aa12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 LYPD6BQ8NI32 183 aa12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 GLMPQ8WWB7 406 aa12.03□□□□□ -0.48
TRAFD1-203ENST00000547063 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 HIST1H1EP10412 219 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 GP9P14770 177 aa12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 GCHFRP30047 84 aa12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 UBE2L3P68036 154 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 IQCF2Q8IXL9 164 aa12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 DYNLRB2Q8TF09 96 aa12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 HRH4Q9H3N8 390 aa12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 WNK1Q9H4A3 2382 aa12.02□□□□□ -0.49
TRAFD1-203ENST00000547063 IGHV3-66A0A0C4DH42 116 aa12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 ZNF785A8K8V0 405 aa12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 IFNA1P01562 189 aa12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 TAGLN2P37802 199 aaKnown RBP12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 FGF8P55075 233 aaPredicted RBP12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 PMS2P11Q13670 270 aa12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 PDE6HQ13956 83 aa12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 SAMD13Q5VXD3 122 aa12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 COL6A5A8TX70 2615 aa12.01□□□□□ -0.49
TRAFD1-203ENST00000547063 A0A087X0K7 114 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 OR10J4P0C629 311 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 NBEAP1P0C6P0 100 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 PYYP10082 97 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 INSL3P51460 131 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 TCF24Q7RTU0 167 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 SUN5Q8TC36 379 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 FXYD5Q96DB9 178 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 ZNF503Q96F45 646 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 MANBALQ9NQG1 85 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 ARL2-SNX15V9GYD0 113 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 TENM1Q9UKZ4 2725 aa12□□□□□ -0.49
TRAFD1-203ENST00000547063 FBN1P35555 2871 aaKnown RBP12□□□□□ -0.49
TRAFD1-203ENST00000547063 TRAV25A0A0B4J276 109 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 A0A1B0GV50 99 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 ZNF253O75346 499 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 SAP30O75446 220 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 EIF3GO75821 320 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 IGLC2P0DOY2 106 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 CD33P20138 364 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 RPL11P62913 178 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 PAFAH1B2P68402 229 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 KRTAP21-3Q3LHN1 58 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 OR2K2Q8NGT1 345 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 MDFIQ99750 246 aa11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 NKX6-2Q9C056 277 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-203ENST00000547063 TRBV19A0A075B6N1 114 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 PSG9Q00887 426 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 ADAMTSL5Q6ZMM2 481 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 RBPMS2Q6ZRY4 209 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 LYPD1Q8N2G4 141 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 WFDC9Q8NEX5 89 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 PCNPQ8WW12 178 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 TXNDC17Q9BRA2 123 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 SLC50A1Q9BRV3 221 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 TMPRSS5Q9H3S3 457 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 NRN1Q9NPD7 142 aa11.98□□□□□ -0.49
TRAFD1-203ENST00000547063 CLEC5AQ9NY25 188 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms