RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TDGF1P13385 188 aa10.15□□□□□ -0.78
COL4A6-209ENST00000545689 DTX1Q86Y01 620 aa10.15□□□□□ -0.78
COL4A6-209ENST00000545689 FNDC4Q9H6D8 234 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-209ENST00000545689 A0A1W2PPI3 338 aa10.15□□□□□ -0.79
COL4A6-209ENST00000545689 IGKV1-16P04430 117 aa10.15□□□□□ -0.79
COL4A6-209ENST00000545689 SAMD5Q5TGI4 173 aa10.15□□□□□ -0.79
COL4A6-209ENST00000545689 FAM110DQ8TAY7 271 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-209ENST00000545689 LIME1Q9H400 295 aa10.14□□□□□ -0.79
COL4A6-209ENST00000545689 IGLV1-44P01699 117 aa10.14□□□□□ -0.79
COL4A6-209ENST00000545689 ZNF562Q6V9R5 426 aa10.14□□□□□ -0.79
COL4A6-209ENST00000545689 E7EQL1 145 aa10.14□□□□□ -0.79
COL4A6-209ENST00000545689 SLC25A16P16260 332 aa10.14□□□□□ -0.79
COL4A6-209ENST00000545689 MORN3Q6PF18 240 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-209ENST00000545689 FAM231DQ6ZW35 169 aa10.14□□□□□ -0.79
COL4A6-209ENST00000545689 ZNF415Q09FC8 603 aa10.14□□□□□ -0.79
COL4A6-209ENST00000545689 C9JQL5 133 aa10.14□□□□□ -0.79
COL4A6-209ENST00000545689 KLF17Q5JT82 389 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-209ENST00000545689 Q8NFD4 153 aa10.13□□□□□ -0.79
COL4A6-209ENST00000545689 COL8A2P25067 703 aa10.13□□□□□ -0.79
COL4A6-209ENST00000545689 CRIM1Q9NZV1 1036 aa10.13□□□□□ -0.79
COL4A6-209ENST00000545689 CEACAM8P31997 349 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-209ENST00000545689 TMEM14CQ9P0S9 112 aa10.13□□□□□ -0.79
COL4A6-209ENST00000545689 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
COL4A6-209ENST00000545689 NCR2O95944 276 aa10.13□□□□□ -0.79
COL4A6-209ENST00000545689 C17orf58Q2M2W7 97 aa10.13□□□□□ -0.79
COL4A6-209ENST00000545689 VOPP1Q96AW1 172 aa10.13□□□□□ -0.79
COL4A6-209ENST00000545689 IGKV1-39P01597 117 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 IGKV1D-39P04432 117 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 WDR86Q86TI4 376 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 DTX2Q86UW9 622 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 NUP210Q8TEM1 1887 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-209ENST00000545689 GATA3P23771 443 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 Q6ZR03 302 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 UBE2E1P51965 193 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 RSPO1Q2MKA7 263 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-209ENST00000545689 LHFPL4Q7Z7J7 247 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 C20orf144Q9BQM9 153 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 A8MWV9 139 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 C15orf65H3BRN8 121 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 LINC00205P59089 165 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 PAX2Q02962 417 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 RCHY1Q96PM5 261 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 TRAV2A0A0B4J234 112 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 DLEU1O43261 78 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 GUSBP1Q15486 140 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 ZNF524Q96C55 264 aa10.12□□□□□ -0.79
COL4A6-209ENST00000545689 MAP1BP46821 2468 aaKnown RBP10.12□□□□□ -0.79
COL4A6-209ENST00000545689 TRGV4A0A0C4DH28 118 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 TMEM249Q2WGJ8 235 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 A0A1W2PRX2 142 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 PRSS46E5RG02 174 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 IL15RAQ13261 267 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 RNF138Q8WVD3 245 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 H3BUX3 64 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 MALP21145 153 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 ZNF726P1Q15940 193 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 ANAPC1Q9H1A4 1944 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 TMEM8BA6NDV4 472 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 LY6DQ14210 128 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 GAGE13Q4V321 117 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 C8orf31Q8N9H6 132 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 PRADC1Q9BSG0 188 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 ERG28Q9UKR5 140 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 SRRM4A7MD48 611 aaKnown RBP10.11□□□□□ -0.79
COL4A6-209ENST00000545689 GTSCR1Q86UQ5 136 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 TMEM219Q86XT9 240 aa10.11□□□□□ -0.79
COL4A6-209ENST00000545689 IGLV3-9A0A075B6K5 115 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 POU2AF1Q16633 256 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 KIR3DL3Q8N743 410 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 WISP1O95388 367 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 CD300EQ496F6 205 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-209ENST00000545689 PLA2G2CQ5R387 149 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 ZNF664Q8N3J9 261 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 C11orf52Q96A22 123 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 MSRB2Q9Y3D2 182 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 TRAV8-2A0A0B4J237 113 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 DAZ1Q9NQZ3 744 aaKnown RBP10.1□□□□□ -0.79
COL4A6-209ENST00000545689 Q6ZSR3 168 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 ALPK2Q86TB3 2170 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 Q8TAT8 98 aa10.1□□□□□ -0.79
COL4A6-209ENST00000545689 TEX43Q6ZNM6 134 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 BCL6BQ8N143 479 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-209ENST00000545689 THAP8Q8NA92 274 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 TRBV19A0A075B6N1 114 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 SLC25A20O43772 301 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 ZNF124Q15973 351 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 RP1L1Q8IWN7 2480 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-209ENST00000545689 K7ENP7 123 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 SRSF6Q13247 344 aaKnown RBP10.09□□□□□ -0.79
COL4A6-209ENST00000545689 LINC01356Q8N9X3 169 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 TMEM158Q8WZ71 300 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 LINC00527Q9UJ94 153 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 SMIM27A0A1W2PRY6 76 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 M0R2P5 195 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 RPL36AP83881 106 aaKnown RBP10.09□□□□□ -0.79
COL4A6-209ENST00000545689 RASL10AQ92737 203 aa10.09□□□□□ -0.79
COL4A6-209ENST00000545689 RPL36ALQ969Q0 106 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms