RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PIN1P1O15428 100 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 COX5AP20674 150 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 ZNF136P52737 540 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 LIM2P55344 173 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 LINC00482Q8N8I6 264 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 MORN4Q8NDC4 146 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 KLK6Q92876 244 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 IFI27L1Q96BM0 104 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 PLEKHA3Q9HB20 300 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 hADV29S1A0JD25 119 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 C17orf51A8MQB3 221 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 PAX4O43316 350 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 SLC25A20O43772 301 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 WISP1O95388 367 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 PSMB2P49721 201 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 UBE2D3P61077 147 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 UBE2D2P62837 147 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 CFHR3Q02985 330 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 ERCC8Q13216 396 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 C19orf54Q5BKX5 351 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 LY6G5BQ8NDX9 201 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 GLIPR2Q9H4G4 154 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 Q9H8V8 135 aa4.07□□□□□ -1.76
UBE4A-203ENST00000545354 PIKFYVEQ9Y2I7 2098 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 IGHV3OR15-7A0A075B7D8 119 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 LINC01553A4QN01 128 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 F8W735 103 aaPredicted RBP4.06□□□□□ -1.76
UBE4A-203ENST00000545354 NDUFC1O43677 76 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 EIF4EBP3O60516 100 aaPredicted RBP4.06□□□□□ -1.76
UBE4A-203ENST00000545354 PPYP01298 95 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 MGST1P10620 155 aaKnown RBP4.06□□□□□ -1.76
UBE4A-203ENST00000545354 FXYD2P54710 66 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 ZNF56Q15929 161 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 DEFB121Q5J5C9 76 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 TMEM207Q6UWW9 146 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 C3orf56Q8N813 242 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 DSCR8Q96T75 97 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 KLK5Q9Y337 293 aaPredicted RBP4.06□□□□□ -1.76
UBE4A-203ENST00000545354 DOCK3Q8IZD9 2030 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 PLXNA4Q9HCM2 1894 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 BAZ2BQ9UIF8 2168 aaKnown RBP4.06□□□□□ -1.76
UBE4A-203ENST00000545354 TICRRQ7Z2Z1 1910 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 ALPK3Q96L96 1907 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 SMIM27A0A1W2PRY6 76 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 C15orf62A8K5M9 175 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 K7EMT4 169 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 BCE1O60756 84 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 HBDP02042 147 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 PLA2G5P39877 138 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 HERVK_113P61574 105 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 HIST1H4AP62805 103 aaKnown RBP4.06□□□□□ -1.76
UBE4A-203ENST00000545354 CST6Q15828 149 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 C5orf38Q86SI9 138 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 SPACA3Q8IXA5 215 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 ZCCHC24Q8N2G6 241 aaKnown RBP4.06□□□□□ -1.76
UBE4A-203ENST00000545354 LINC01555Q8NAE3 123 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 WFDC11Q8NEX6 87 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 CNRIP1Q96F85 164 aaPredicted RBP4.06□□□□□ -1.76
UBE4A-203ENST00000545354 C16orf95Q9H693 158 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 NINQ8N4C6 2090 aa4.06□□□□□ -1.76
UBE4A-203ENST00000545354 CACNA1AO00555 2505 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 H3BMM0 161 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 UPK2O00526 184 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 CCL16O15467 120 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 DYNLT3P51808 116 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 RPL18Q07020 188 aaKnown RBP4.05□□□□□ -1.76
UBE4A-203ENST00000545354 RSPO1Q2MKA7 263 aaPredicted RBP4.05□□□□□ -1.76
UBE4A-203ENST00000545354 FAM120AOSQ5T036 256 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 HIST2H2BCQ6DN03 193 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 HIST2H2BDQ6DRA6 164 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 Q6ZS46 218 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 Q8N1Y9 231 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 PRR26Q8N8Z3 221 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 UBE2WQ96B02 151 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 C18orf12Q96KH6 178 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 TM2D3Q9BRN9 247 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 C11orf1Q9H5F2 150 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 SELENOKQ9Y6D0 94 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 TMEM14AQ9Y6G1 99 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 X6R8D5 127 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 MIA3Q5JRA6 1907 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 PIEZO1Q92508 2521 aa4.05□□□□□ -1.76
UBE4A-203ENST00000545354 CCL1P22362 96 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 SAA4P35542 130 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 PAX8Q06710 450 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 TCF15Q12870 199 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 ABCA11PQ4W5N1 156 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 CENPWQ5EE01 88 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 C1orf100Q5SVJ3 147 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 FAM104BQ5XKR9 115 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 SLC22A24Q8N4F4 322 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 C11orf45Q8TAV5 145 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 C10orf105Q8TEF2 133 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 PLA2G12BQ9BX93 195 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 PLA2G12AQ9BZM1 189 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 CALYQ9NYX4 217 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 ANKRD12Q6UB98 2062 aa4.04□□□□□ -1.76
UBE4A-203ENST00000545354 MED19A0JLT2 244 aaPredicted RBP4.04□□□□□ -1.76
UBE4A-203ENST00000545354 H3BVH4 76 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms