RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 CBX5P45973 191 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 MEOX2P50222 304 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 WNT4P56705 351 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 RPL19P84098 196 aaKnown RBP1.99□□□□□ -2.09
CHD4-209ENST00000542717 FGL1Q08830 312 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 CATR1Q13166 79 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 ARL6IP1Q15041 203 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 VWC2Q2TAL6 325 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 MAJINQ3KP22 176 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 IDNKQ5T6J7 187 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 FAM162BQ5T6X4 162 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 CCDC190Q86UF4 302 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 OR8I2Q8N0Y5 310 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 TMEM75Q8N9X5 138 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 INO80EQ8NBZ0 244 aaPredicted RBP1.99□□□□□ -2.09
CHD4-209ENST00000542717 ZNF738Q8NE65 137 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 TSPAN14Q8NG11 270 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 OR10R2Q8NGX6 335 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 PYDC1Q8WXC3 89 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 IL22RA2Q969J5 263 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 UBE2WQ96B02 151 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 FAM3DQ96BQ1 224 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 GFI1Q99684 422 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 ARPC5LQ9BPX5 153 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 C9orf16Q9BUW7 83 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 PLEKHA2Q9HB19 425 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 MRPL16Q9NX20 251 aaKnown RBP1.99□□□□□ -2.09
CHD4-209ENST00000542717 FKBP11Q9NYL4 201 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 PLAC8Q9NZF1 115 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 COMMD9Q9P000 198 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 AK6Q9Y3D8 172 aaKnown RBP1.99□□□□□ -2.09
CHD4-209ENST00000542717 USH2AO75445 5202 aa1.99□□□□□ -2.09
CHD4-209ENST00000542717 IGLV1-50A0A075B6I6 118 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 IGHV3-64A0A075B6Q5 118 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 LOC100131303A0A0U1RQF7 123 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 USP17L23D6RBM5 183 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 CORTO00230 105 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 SOCS3O14543 225 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 ARL6IP5O75915 188 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 IFNA7P01567 189 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 IGKV1-17P01599 117 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 PRSS1P07477 247 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 SFTA3P0C7M3 94 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 SEC11BP0C7V7 166 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 RD3LP0DJH9 198 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 CT45A10P0DMU9 189 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 RAB6AP20340 208 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 FCGR2CP31995 323 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 RPL13AP40429 203 aaKnown RBP1.98□□□□□ -2.09
CHD4-209ENST00000542717 SUB1P53999 127 aaKnown RBP eCLIP1.98□□□□□ -2.09
CHD4-209ENST00000542717 TIRAPP58753 221 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 ARPC4P59998 168 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 CIRBPQ14011 172 aaKnown RBP1.98□□□□□ -2.09
CHD4-209ENST00000542717 MEF2DQ14814 521 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 AADACL3Q5VUY0 350 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 HACD4Q5VWC8 232 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 IGFL4Q6B9Z1 124 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 ZFP1Q6P2D0 407 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 NANOGP1Q8N7R0 232 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 ZNF680Q8NEM1 530 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 OR51G1Q8NGK1 321 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 OR1S2Q8NGQ3 325 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 OR4X1Q8NH49 305 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 OR51H1Q8NH63 302 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 SPACA4Q8TDM5 124 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 SECTM1Q8WVN6 248 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 SLC25A38Q96DW6 304 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 SEC22AQ96IW7 307 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 DNAJC30Q96LL9 226 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 TSC22D3Q99576 134 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 RETNLBQ9BQ08 111 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 C20orf144Q9BQM9 153 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 MLST8Q9BVC4 326 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 C1orf43Q9BWL3 253 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 CCL28Q9NRJ3 127 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 LINC00846Q9NV44 126 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 MRPL36Q9P0J6 103 aaKnown RBP1.98□□□□□ -2.09
CHD4-209ENST00000542717 ANXA10Q9UJ72 324 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 ELF5Q9UKW6 265 aaPredicted RBP1.98□□□□□ -2.09
CHD4-209ENST00000542717 PRNDQ9UKY0 176 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 V9GY05 133 aa1.98□□□□□ -2.09
CHD4-209ENST00000542717 IGLV7-46A0A075B6I9 117 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.97□□□□□ -2.09
CHD4-209ENST00000542717 TRAV12-3A0A0B4J271 114 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 IGKV2-24A0A0C4DH68 120 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 METTL21EPA6NDL7 271 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 FABP12A6NFH5 140 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 CRYM-AS1A6NIL9 109 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 SPINK4O60575 86 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 PGLYRP1O75594 196 aaPredicted RBP1.97□□□□□ -2.09
CHD4-209ENST00000542717 CIB2O75838 187 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 KRASP01116 189 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 PPYP01298 95 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 PFN1P07737 140 aaKnown RBP1.97□□□□□ -2.09
CHD4-209ENST00000542717 F2RP25116 425 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 OR10J1P30954 320 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 G6PCP35575 357 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 GALR1P47211 349 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 RFX2P48378 723 aa1.97□□□□□ -2.09
CHD4-209ENST00000542717 RND2P52198 227 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms