RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 APOC3P02656 99 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 MT-ND4LP03901 98 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 MAS1P04201 325 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 LGALS1P09382 135 aaKnown RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 OR5AC1P0C628 307 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 AKAIN1P0CW23 69 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 CCL1P22362 96 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 GADD45AP24522 165 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 TGFBR1P36897 503 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 CA7P43166 264 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 LINC01547P58512 204 aaPredicted RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 HOXC5Q00444 222 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 MEF2BQ02080 365 aaPredicted RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 TMEM267Q0VDI3 215 aaPredicted RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 PSG7Q13046 419 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 PEA15Q15121 130 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 RBMY1FQ15415 496 aaKnown RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 EIF5AL1Q6IS14 154 aaKnown RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 GLIPR1L1Q6UWM5 242 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 DRAM1Q8N682 238 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 FER1L6-AS1Q8NA97 138 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 Q8NBF4 154 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 OR8B12Q8NGG6 310 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 PP6455Q8WZ26 134 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 STARD4Q96DR4 205 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 TMEM204Q9BSN7 226 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 EIF5A2Q9GZV4 153 aaKnown RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 CHST6Q9GZX3 395 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 TMEM222Q9H0R3 208 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 PARP11Q9NR21 331 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 DHRS4-AS1Q9P1J3 65 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 PROCRQ9UNN8 238 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 POMPQ9Y244 141 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 ENPP4Q9Y6X5 453 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 CENPEQ02224 2701 aa4.06□□□□□ -1.76
DDB1-219ENST00000541513 HEATR1Q9H583 2144 aaKnown RBP4.06□□□□□ -1.76
DDB1-219ENST00000541513 A0A087X002 238 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 A0A0J9YW62 118 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 TCRBV3S1A0A5B6 114 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 ZNF850A8MQ14 1090 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 F5H5P2 479 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 ZNF253O75346 499 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 CSN2P05814 226 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 PLA2G2AP14555 144 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 CTLA4P16410 223 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 ZNF14P17017 642 aaPredicted RBP4.05□□□□□ -1.76
DDB1-219ENST00000541513 ZNF19P17023 458 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 TMBIM6P55061 237 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 RPL23P62829 140 aaKnown RBP4.05□□□□□ -1.76
DDB1-219ENST00000541513 CXCL6P80162 114 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 IL15RAQ13261 267 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 IGFBP7Q16270 282 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 TMEM106AQ96A25 262 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 FXYD5Q96DB9 178 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 SLAMF6Q96DU3 332 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 DERL3Q96Q80 235 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 LINC01587Q99440 93 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 S100A13Q99584 98 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 PRADC1Q9BSG0 188 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 PBOV1Q9GZY1 135 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 TMEM133Q9H2Q1 129 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 NOX3Q9HBY0 568 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 LINC00527Q9UJ94 153 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 FAM215AQ9Y5M1 114 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 PLCE1Q9P212 2302 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 RTTNQ86VV8 2226 aa4.05□□□□□ -1.76
DDB1-219ENST00000541513 UTP20O75691 2785 aaKnown RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 BAHCC1Q9P281 2608 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 IGKV1D-42A0A075B6H8 117 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 LOC102725191A0A1B0GVB3 256 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 A0A1B0GW64 132 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 DHRS12A0PJE2 317 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 CPSF4LA6NMK7 179 aaKnown RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 J3QKU1 62 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 OR2T1O43869 369 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 MRPS14O60783 128 aaKnown RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 SS18L1O75177 396 aaPredicted RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 ZNF432O94892 652 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 IGHV3-23P01764 117 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 PMP2P02689 132 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 MP68P56378 58 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 NDUFA6P56556 154 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 SMIM11AP58511 58 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 SNRPD2P62316 118 aaKnown RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 GRB2P62993 217 aaKnown RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 RSPO1Q2MKA7 263 aaPredicted RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 BCL2L15Q5TBC7 163 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 C1orf140Q5VVS0 124 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 C9orf47Q6ZRZ4 202 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 PRNTQ86SH4 94 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 PRIMA1Q86XR5 153 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 C5orf17Q8NAS9 161 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 OR10D4PQ8NGN7 298 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 ADAT3Q96EY9 351 aaPredicted RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 HSD17B10Q99714 261 aaKnown RBP4.04□□□□□ -1.76
DDB1-219ENST00000541513 MIEN1Q9BRT3 115 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 MED28Q9H204 178 aa4.04□□□□□ -1.76
DDB1-219ENST00000541513 TUBA4BQ9H853 241 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms