RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 OR11H6Q8NGC7 330 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 RPEQ96AT9 228 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 HSBP1O75506 76 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 TCF24Q7RTU0 167 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 BLNKQ8WV28 456 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 IGFBPL1Q8WX77 278 aa13.61□□□□□ -0.23
SPIDR-227ENST00000541342 M0R2Z0 102 aa13.6□□□□□ -0.23
SPIDR-227ENST00000541342 LGALS7P47929 136 aa13.6□□□□□ -0.23
SPIDR-227ENST00000541342 VMA21Q3ZAQ7 101 aa13.6□□□□□ -0.23
SPIDR-227ENST00000541342 GTSF1Q8WW33 167 aa13.6□□□□□ -0.23
SPIDR-227ENST00000541342 HIST1H1EP10412 219 aaKnown RBP13.6□□□□□ -0.23
SPIDR-227ENST00000541342 Q56UQ5 140 aa13.6□□□□□ -0.23
SPIDR-227ENST00000541342 RNASEKQ6P5S7 137 aaKnown RBP13.6□□□□□ -0.23
SPIDR-227ENST00000541342 Q6ZVH6 145 aa13.6□□□□□ -0.23
SPIDR-227ENST00000541342 ZFHX3Q15911 3703 aa13.6□□□□□ -0.23
SPIDR-227ENST00000541342 MYO18BQ8IUG5 2567 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 SH2D7A6NKC9 451 aaPredicted RBP13.59□□□□□ -0.23
SPIDR-227ENST00000541342 CRYGBP07316 175 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 ORM2P19652 201 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 BPESC1Q9GZL8 116 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 PPP1R14DQ9NXH3 145 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 IGLC7A0M8Q6 106 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 IGLL1P15814 213 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 PRTN3P24158 256 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 OR4F17Q8NGA8 305 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 PRSS22Q9GZN4 317 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 TP73-AS1Q9UF72 201 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 ODF3BA8MYP8 253 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 M0QZ24 198 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 CRYGCP07315 174 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 ATP5L2Q7Z4Y8 100 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 CLEC5AQ9NY25 188 aa13.59□□□□□ -0.23
SPIDR-227ENST00000541342 IGHV4-39P01824 125 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 SLC25A5P05141 298 aaKnown RBP13.58□□□□□ -0.24
SPIDR-227ENST00000541342 PAX2Q02962 417 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 PMCHL1Q16048 86 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 Q71RC1 249 aaPredicted RBP13.58□□□□□ -0.24
SPIDR-227ENST00000541342 OR2D3Q8NGH3 330 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 OR1B1Q8NGR6 318 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 CSMD2Q7Z408 3487 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 PGPA6NDG6 321 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 PVRIGQ6DKI7 326 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 KLHDC1Q8N7A1 406 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 RBM14Q96PK6 669 aaKnown RBP13.58□□□□□ -0.24
SPIDR-227ENST00000541342 ZNF462Q96JM2 2506 aa13.58□□□□□ -0.24
SPIDR-227ENST00000541342 TRAV9-2A0A087WT02 112 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 GP9P14770 177 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 HTR1DP28221 377 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 UBE2G1P62253 170 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 VMO1Q7Z5L0 202 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 TEX45Q8NA69 505 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 GPR82Q96P67 336 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 RPH3ALQ9UNE2 315 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 MRPS16Q9Y3D3 137 aaKnown RBP13.57□□□□□ -0.24
SPIDR-227ENST00000541342 MED13LQ71F56 2210 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 A0A1W2PRD5 423 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 A0A1W2PRF3 423 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 A0A1W2PRM7 423 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 H3BTX0 84 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 TIMM23O14925 209 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 LEMD1Q68G75 181 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 HILPDAQ9Y5L2 63 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 C19orf71A6NCJ1 209 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 HINT1P49773 126 aaPredicted RBP13.57□□□□□ -0.24
SPIDR-227ENST00000541342 SUB1P53999 127 aaKnown RBP eCLIP13.57□□□□□ -0.243e-6■■■□□ 16.6
SPIDR-227ENST00000541342 RPP21Q9H633 154 aaKnown RBP13.57□□□□□ -0.24
SPIDR-227ENST00000541342 DPM3Q9P2X0 92 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 SIGLEC9Q9Y336 463 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 CELSR2Q9HCU4 2923 aa13.57□□□□□ -0.24
SPIDR-227ENST00000541342 LTAP01374 205 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 APELAP0DMC3 54 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 LMO4P61968 165 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 TCF21O43680 179 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 UBR5O95071 2799 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-227ENST00000541342 NBEAP1P0C6P0 100 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 FOXA3P55318 350 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-227ENST00000541342 RELQ04864 619 aaPredicted RBP13.56□□□□□ -0.24
SPIDR-227ENST00000541342 C1orf122Q6ZSJ8 110 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 LINC00173Q6ZV60 143 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 PERPQ96FX8 193 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 WNK2Q9Y3S1 2297 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 IGHV3-21A0A0B4J1V1 117 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 HBBP68871 147 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 FBLN7Q53RD9 439 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 ZNF843Q8N446 348 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 CFHR4Q92496 578 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 SMIM12Q96EX1 92 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 CHRDL1Q9BU40 450 aa13.56□□□□□ -0.24
SPIDR-227ENST00000541342 HOXB4P17483 251 aaPredicted RBP13.55□□□□□ -0.24
SPIDR-227ENST00000541342 CCL25O15444 150 aa13.55□□□□□ -0.24
SPIDR-227ENST00000541342 TOMM40O96008 361 aa13.55□□□□□ -0.24
SPIDR-227ENST00000541342 UNQ5815/PRO19632Q6UWF5 114 aa13.55□□□□□ -0.24
SPIDR-227ENST00000541342 SIRPDQ9H106 197 aa13.55□□□□□ -0.24
SPIDR-227ENST00000541342 GSX1Q9H4S2 264 aaPredicted RBP13.55□□□□□ -0.24
SPIDR-227ENST00000541342 TRGV9Q99603 122 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 FBXL15Q9H469 300 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 CRXO43186 299 aaPredicted RBP13.54□□□□□ -0.24
SPIDR-227ENST00000541342 STXBP6Q8NFX7 210 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 EPG5Q9HCE0 2579 aa13.54□□□□□ -0.24
SPIDR-227ENST00000541342 IGHV1-24A0A0C4DH33 117 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms