RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 UQCRQO14949 82 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 RER1O15258 196 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 IGKV3-15P01624 115 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 TCRAP04437 139 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 COX6A1P12074 109 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 MDKP21741 143 aaPredicted RBP3.32□□□□□ -1.88
PRKDC-209ENST00000540819 FGF7P21781 194 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 DIAPH2-AS1Q14236 149 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 SOSTDC1Q6X4U4 206 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 OR4B1Q8NGF8 309 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 TIMM9Q9Y5J7 89 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 MYOM3Q5VTT5 1437 aa3.32□□□□□ -1.88
PRKDC-209ENST00000540819 KIF26AQ9ULI4 1882 aaPredicted RBP3.32□□□□□ -1.88
PRKDC-209ENST00000540819 ATG2AQ2TAZ0 1938 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 SYNJ1O43426 1573 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 RIC1Q4ADV7 1423 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 TRAV27A0A087WT01 109 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 SDCBPO00560 298 aaPredicted RBP3.31□□□□□ -1.88
PRKDC-209ENST00000540819 MT-ND6P03923 174 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 HLA-DRB4P13762 266 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 FXYD2P54710 66 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 DYNLT1P63172 113 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 FOXF1Q12946 379 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 EBI3Q14213 229 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 C2orf83Q53S99 150 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 LYZL1Q6UWQ5 148 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 PATE2Q6UY27 113 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.31□□□□□ -1.88
PRKDC-209ENST00000540819 DIRC1Q969H9 104 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 NHP2Q9NX24 153 aaKnown RBP3.31□□□□□ -1.88
PRKDC-209ENST00000540819 CCDC167Q9P0B6 97 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 HLA-DRB4X5D2U9 266 aa3.31□□□□□ -1.88
PRKDC-209ENST00000540819 ZFC3H1O60293 1989 aaKnown RBP3.31□□□□□ -1.88
PRKDC-209ENST00000540819 NISCHQ9Y2I1 1504 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 FAM135BQ49AJ0 1406 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 IGLV3-12A0A075B6K2 115 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 IGLV3-9A0A075B6K5 115 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 FAM236AA0A1B0GUQ0 79 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 FAM236BA0A1B0GV22 79 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 SLC25A5P05141 298 aaKnown RBP3.3□□□□□ -1.88
PRKDC-209ENST00000540819 LSM3P62310 102 aaKnown RBP3.3□□□□□ -1.88
PRKDC-209ENST00000540819 PPP3R1P63098 170 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 PLGLB1Q02325 96 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 LINC00483Q53H64 154 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 RPS19BP1Q86WX3 136 aaKnown RBP3.3□□□□□ -1.88
PRKDC-209ENST00000540819 RNF182Q8N6D2 247 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 SDF2Q99470 211 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 CST9LQ9H4G1 147 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 RPS10P5Q9NQ39 176 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 SCN3BQ9NY72 215 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 TANC2Q9HCD6 1990 aa3.3□□□□□ -1.88
PRKDC-209ENST00000540819 MALRD1Q5VYJ5 2156 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 DLC1Q96QB1 1528 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 MBD5Q9P267 1494 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 MYH13Q9UKX3 1938 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 TRBV10-2A0A0K0K1G8 114 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 H7C2G1 150 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 GNRH2O43555 120 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 DSCR10P59022 87 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 KLRD1Q13241 179 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 PABPC1L2AQ5JQF8 200 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 KPRPQ5T749 579 aaPredicted RBP3.29□□□□□ -1.88
PRKDC-209ENST00000540819 SCIMPQ6UWF3 145 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 TMEM91Q6ZNR0 172 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 TEN1Q86WV5 123 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 LYPD6Q86Y78 171 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 OR5D14Q8NGL3 314 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 DEDD2Q8WXF8 326 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 PP6455Q8WZ26 134 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 MRPS24Q96EL2 167 aaKnown RBP3.29□□□□□ -1.88
PRKDC-209ENST00000540819 OR4C12Q96R67 309 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 LINC00467Q9BRT7 94 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 SCN9AQ15858 1988 aa3.29□□□□□ -1.88
PRKDC-209ENST00000540819 PLA2R1Q13018 1463 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 MYO5AQ9Y4I1 1855 aaKnown RBP3.28□□□□□ -1.88
PRKDC-209ENST00000540819 PRR14LQ5THK1 2151 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 WDR90Q96KV7 1748 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 C11orf86A6NJI1 115 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 BBIP1A8MTZ0 92 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 CDC42EP2O14613 210 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 HBDP02042 147 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 AKAIN1P0CW23 69 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 ZNF14P17017 642 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-209ENST00000540819 ZNF22P17026 224 aaPredicted RBP3.28□□□□□ -1.88
PRKDC-209ENST00000540819 GNG4P50150 75 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 MRPS36P82909 103 aaKnown RBP3.28□□□□□ -1.88
PRKDC-209ENST00000540819 SPINT4Q6UDR6 99 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 FAM216BQ8N7L0 139 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 AQP3Q92482 292 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 OR8B2Q96RD0 313 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 ZFP30Q9Y2G7 519 aa3.28□□□□□ -1.88
PRKDC-209ENST00000540819 PTPRBP23467 1997 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 WDR97A6NE52 1622 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-209ENST00000540819 LOC100130705A0A1B0GUX0 176 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 TRGC1P0CF51 173 aa3.27□□□□□ -1.89
PRKDC-209ENST00000540819 ZNF705BP0CI00 300 aaPredicted RBP3.27□□□□□ -1.89
PRKDC-209ENST00000540819 HIST1H1BP16401 226 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms