RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 PSMB11A5LHX3 300 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 GGTLC3B5MD39 225 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 SYS1-DBNDD2H3BUS1 97 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 SIVA1O15304 175 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 NTF3P20783 257 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 MPV17P39210 176 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 MYCNOSP40205 109 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 FOXA3P55318 350 aaPredicted RBP6.15□□□□□ -1.42
CCDC60-204ENST00000539847 ATP5J2P56134 94 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 SPINK9Q5DT21 86 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 C9orf135Q5VTT2 229 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 FAM19A2Q8N3H0 131 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 GATD1Q8NB37 220 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 UBALD1Q8TB05 177 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 Q8TCH9 128 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 KLF14Q8TD94 323 aaPredicted RBP6.15□□□□□ -1.42
CCDC60-204ENST00000539847 CSTL1Q9H114 145 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 IFI27L2Q9H2X8 130 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 SERTAD4Q9NUC0 356 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 GNG12Q9UBI6 72 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 OR51B2Q9Y5P1 312 aa6.15□□□□□ -1.42
CCDC60-204ENST00000539847 RAI1Q7Z5J4 1906 aaPredicted RBP6.15□□□□□ -1.43
CCDC60-204ENST00000539847 ANK3Q12955 4377 aaKnown RBP6.14□□□□□ -1.43
CCDC60-204ENST00000539847 OR4C46A6NHA9 309 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 OVOL3O00110 214 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 PEX7O00628 323 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 CIDEAO60543 219 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 HBBP68871 147 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 SRYQ05066 204 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 Q56UQ5 140 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 FAM120AOSQ5T036 256 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 GDF5OSQ5U4N7 250 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 OR4A47Q6IF82 309 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 LCN12Q6JVE5 192 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 Q6ZR03 302 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 SSX8Q7RTT4 187 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 CNEP1R1Q8N9A8 125 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 OR1N2Q8NGR9 330 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 OR4A5Q8NH83 315 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 GPR82Q96P67 336 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 MLST8Q9BVC4 326 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 MAP1LC3CQ9BXW4 147 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 SCRT2Q9NQ03 307 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 PLSCR4Q9NRQ2 329 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 PPIAL4AQ9Y536 164 aa6.14□□□□□ -1.43
CCDC60-204ENST00000539847 TRAV3A0A0B4J244 114 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.13□□□□□ -1.43
CCDC60-204ENST00000539847 SRRM4A7MD48 611 aaKnown RBP6.13□□□□□ -1.43
CCDC60-204ENST00000539847 SRRM5B3KS81 715 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 H3BRM9 83 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 NUDT3O95989 172 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 IGKV3-15P01624 115 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 IGLC1P0CG04 106 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 MGST1P10620 155 aaKnown RBP6.13□□□□□ -1.43
CCDC60-204ENST00000539847 SSTR5P35346 364 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 SUB1P53999 127 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC60-204ENST00000539847 ERHP84090 104 aaKnown RBP6.13□□□□□ -1.43
CCDC60-204ENST00000539847 PAX2Q02962 417 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 FXYD3Q14802 87 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 LINC01545Q5VT33 79 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 PRR27Q6MZM9 219 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 ZNF329Q86UD4 541 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 CD177Q8N6Q3 437 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 LINC00482Q8N8I6 264 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 THAP8Q8NA92 274 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 OR2Z1Q8NG97 314 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 RFESDQ8TAC1 157 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 H1FXQ92522 213 aaKnown RBP6.13□□□□□ -1.43
CCDC60-204ENST00000539847 RNF125Q96EQ8 232 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 NPFFR1Q9GZQ6 430 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 GCM1Q9NP62 436 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 NGBQ9NPG2 151 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 EPDR1Q9UM22 224 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 PROCRQ9UNN8 238 aa6.13□□□□□ -1.43
CCDC60-204ENST00000539847 TRAV34A0A0B4J273 112 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 KBTBD11-OT1A0A1B0GTJ5 212 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 TEX50A0A1B0GTY4 177 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 C19orf71A6NCJ1 209 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 HIGD1CA8MV81 97 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 NDUFS8O00217 210 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 WNT9BO14905 357 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 SMIM17P0DL12 118 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 RNASE2P10153 161 aaKnown RBP6.12□□□□□ -1.43
CCDC60-204ENST00000539847 COX8AP10176 69 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 GPR183P32249 361 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 TCL1AP56279 114 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 BPIFB3P59826 476 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 ALKBH6Q3KRA9 238 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 MPV17L2Q567V2 206 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 PVRIGQ6DKI7 326 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 RNASEKQ6P5S7 137 aaKnown RBP6.12□□□□□ -1.43
CCDC60-204ENST00000539847 RBPMS2Q6ZRY4 209 aaKnown RBP6.12□□□□□ -1.43
CCDC60-204ENST00000539847 OR2T6Q8NHC8 308 aa6.12□□□□□ -1.43
CCDC60-204ENST00000539847 OSR1Q8TAX0 266 aaPredicted RBP6.12□□□□□ -1.43
CCDC60-204ENST00000539847 FAM168AQ92567 244 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms