RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ZNF492Q9P255 531 aa10.99□□□□□ -0.65
LIMK1-208ENST00000538333 RNF24Q9Y225 148 aa10.99□□□□□ -0.65
LIMK1-208ENST00000538333 TRAV8-1A0A0A6YYK1 113 aa10.98□□□□□ -0.65
LIMK1-208ENST00000538333 VWC2LB2RUY7 222 aa10.98□□□□□ -0.65
LIMK1-208ENST00000538333 RAB4BP61018 213 aa10.98□□□□□ -0.65
LIMK1-208ENST00000538333 PKIAP61925 76 aa10.98□□□□□ -0.65
LIMK1-208ENST00000538333 SIGLEC15Q6ZMC9 328 aa10.98□□□□□ -0.65
LIMK1-208ENST00000538333 OR4F17Q8NGA8 305 aa10.98□□□□□ -0.65
LIMK1-208ENST00000538333 HSPB9Q9BQS6 159 aa10.98□□□□□ -0.65
LIMK1-208ENST00000538333 C1RLQ9NZP8 487 aa10.98□□□□□ -0.65
LIMK1-208ENST00000538333 POLR3KQ9Y2Y1 108 aaPredicted RBP10.98□□□□□ -0.65
LIMK1-208ENST00000538333 HIGD1CA8MV81 97 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 PAX1P15863 534 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 KIAA1644Q3SXP7 199 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 LPAR2Q9HBW0 351 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 ZNF331Q9NQX6 463 aaPredicted RBP10.97□□□□□ -0.65
LIMK1-208ENST00000538333 THYN1Q9P016 225 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 TRBV6-1A0A0K0K1D8 114 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 OR2J3O76001 311 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 FCGR2BP31994 310 aaPredicted RBP10.97□□□□□ -0.65
LIMK1-208ENST00000538333 PAFAH1B2P68402 229 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 SLAQ13239 276 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 Q56UQ5 140 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 CT83Q5H943 113 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 OR10J3Q5JRS4 329 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 GDF5OSQ5U4N7 250 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 GOLT1AQ6ZVE7 132 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 LYPD1Q8N2G4 141 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 PIP4P2Q8N4L2 257 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 ZNF414Q96IQ9 312 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 RPP21Q9H633 154 aaKnown RBP10.97□□□□□ -0.65
LIMK1-208ENST00000538333 ABCA2Q9BZC7 2435 aa10.97□□□□□ -0.65
LIMK1-208ENST00000538333 BRS3P32247 399 aa10.96□□□□□ -0.65
LIMK1-208ENST00000538333 KLK9Q2XQG4 91 aa10.96□□□□□ -0.65
LIMK1-208ENST00000538333 Q71RC1 249 aaPredicted RBP10.96□□□□□ -0.65
LIMK1-208ENST00000538333 BAGE3Q86Y29 109 aa10.96□□□□□ -0.65
LIMK1-208ENST00000538333 MS4A10Q96PG2 267 aa10.96□□□□□ -0.65
LIMK1-208ENST00000538333 ZMAT5Q9UDW3 170 aaKnown RBP10.96□□□□□ -0.65
LIMK1-208ENST00000538333 KLK9Q9UKQ9 250 aa10.96□□□□□ -0.65
LIMK1-208ENST00000538333 NPIPB6E9PJ23 425 aa10.96□□□□□ -0.66
LIMK1-208ENST00000538333 CTSGP08311 255 aa10.96□□□□□ -0.66
LIMK1-208ENST00000538333 TPPP2P59282 170 aa10.96□□□□□ -0.66
LIMK1-208ENST00000538333 ZNF664Q8N3J9 261 aa10.96□□□□□ -0.66
LIMK1-208ENST00000538333 PRO1933Q9H354 126 aa10.96□□□□□ -0.66
LIMK1-208ENST00000538333 A0A1B0GXF2 115 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 TSTD3H0UI37 97 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 NPFFO15130 113 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 IGHV3-23P01764 117 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 APCSP02743 223 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 SRIP30626 198 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 IQCJQ1A5X6 159 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 Q6ZWC4 215 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 ATP5L2Q7Z4Y8 100 aa10.95□□□□□ -0.66
LIMK1-208ENST00000538333 FAM110DQ8TAY7 271 aaPredicted RBP10.95□□□□□ -0.66
LIMK1-208ENST00000538333 CENPVL3A0A0U1RRI6 287 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 OR2T8A6NH00 312 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 ZNF785A8K8V0 405 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 P01737 135 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 PDE6HQ13956 83 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 S100A7AQ86SG5 101 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 CIARTQ8N365 385 aaPredicted RBP10.94□□□□□ -0.66
LIMK1-208ENST00000538333 TMEM75Q8N9X5 138 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 GTSF1Q8WW33 167 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 TXN2Q99757 166 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 FBXL7Q9UJT9 491 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 A8MWL6 223 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 PAX8Q06710 450 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 C16orf54Q6UWD8 224 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 TCF24Q7RTU0 167 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 PRNTQ86SH4 94 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 RCHY1Q96PM5 261 aa10.94□□□□□ -0.66
LIMK1-208ENST00000538333 ATP6V0E1O15342 81 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 FOSL1P15407 271 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 VN1R17PQ8TDU5 208 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 GFRA4Q9GZZ7 299 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 CHD6Q8TD26 2715 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 DDTP30046 118 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 FAM209BQ5JX69 171 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 TMUB1Q9BVT8 246 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 ZFHX3Q15911 3703 aa10.93□□□□□ -0.66
LIMK1-208ENST00000538333 VPS13CQ709C8 3753 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 DIRC3C9JPN6 131 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 M0R3E3 92 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 ZNF253O75346 499 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 CD33P20138 364 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 PSG3Q16557 428 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 UNQ5815/PRO19632Q6UWF5 114 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 ZNF502Q8TBZ5 544 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 DAZAP1Q96EP5 407 aaKnown RBP10.92□□□□□ -0.66
LIMK1-208ENST00000538333 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 KMT2BQ9UMN6 2715 aaPredicted RBP10.92□□□□□ -0.66
LIMK1-208ENST00000538333 FAM231BA6NCW3 169 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 GOSR1O95249 250 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 SCGB1D1O95968 90 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 GPX1P07203 203 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 ECSCRQ19T08 205 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 OR4B1Q8NGF8 309 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 C18orf32Q8TCD1 76 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 ZC2HC1AQ96GY0 325 aa10.92□□□□□ -0.66
LIMK1-208ENST00000538333 KCNS1Q96KK3 526 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms