RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SRSF8Q9BRL6 282 aaKnown RBP13.7□□□□□ -0.22
SCARB1-205ENST00000538291 NMSQ5H8A3 153 aa13.7□□□□□ -0.22
SCARB1-205ENST00000538291 D6R8Y8 96 aa13.7□□□□□ -0.22
SCARB1-205ENST00000538291 LINC00473A8K010 186 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 ERCC8Q13216 396 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 SH2D1AO60880 128 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 C6orf226Q5I0X4 101 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 Q8TAT8 98 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 C1orf159Q96HA4 380 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 KIF26BQ2KJY2 2108 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 DEFB130BP0DP73 79 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 DEFB130AP0DP74 79 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 PSG3Q16557 428 aa13.69□□□□□ -0.22
SCARB1-205ENST00000538291 SRSF3P84103 164 aaKnown RBP13.69□□□□□ -0.22
SCARB1-205ENST00000538291 ATXN8Q156A1 80 aa13.68□□□□□ -0.22
SCARB1-205ENST00000538291 LSM4Q9Y4Z0 139 aaKnown RBP13.68□□□□□ -0.22
SCARB1-205ENST00000538291 UBE2E1P51965 193 aa13.68□□□□□ -0.22
SCARB1-205ENST00000538291 KLHDC3Q9BQ90 382 aa13.68□□□□□ -0.22
SCARB1-205ENST00000538291 CHD5Q8TDI0 1954 aa13.68□□□□□ -0.22
SCARB1-205ENST00000538291 SUPT4H1P63272 117 aaKnown RBP13.68□□□□□ -0.22
SCARB1-205ENST00000538291 PRR30Q53SZ7 412 aaPredicted RBP13.68□□□□□ -0.22
SCARB1-205ENST00000538291 ERG28Q9UKR5 140 aa13.68□□□□□ -0.22
SCARB1-205ENST00000538291 TRAV1-1A0A0B4J248 108 aa13.68□□□□□ -0.22
SCARB1-205ENST00000538291 C5orf63A6NC05 138 aa13.68□□□□□ -0.22
SCARB1-205ENST00000538291 ATRAIDQ6UW56 229 aa13.68□□□□□ -0.22
SCARB1-205ENST00000538291 A6NNC1 897 aa13.67□□□□□ -0.22
SCARB1-205ENST00000538291 J3QKU1 62 aa13.67□□□□□ -0.22
SCARB1-205ENST00000538291 DEFB131AP59861 70 aa13.67□□□□□ -0.22
SCARB1-205ENST00000538291 GATD1Q8NB37 220 aa13.67□□□□□ -0.22
SCARB1-205ENST00000538291 F8WEM9 126 aa13.67□□□□□ -0.22
SCARB1-205ENST00000538291 ORAOV1Q8WV07 137 aa13.67□□□□□ -0.22
SCARB1-205ENST00000538291 RUSC1-AS1Q66K80 236 aa13.67□□□□□ -0.22
SCARB1-205ENST00000538291 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.67□□□□□ -0.22
SCARB1-205ENST00000538291 HGFACQ04756 655 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 C14orf178Q8N769 122 aaPredicted RBP13.66□□□□□ -0.22
SCARB1-205ENST00000538291 Q96MF0 132 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 RASL11AQ6T310 242 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 TMEM242Q9NWH2 141 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 CLDN16Q9Y5I7 305 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 MS4A6AQ9H2W1 248 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 A0A0G2JMZ2 1700 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 LRRC37A2A6NM11 1700 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 SS18Q15532 418 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 RPP25LQ8N5L8 163 aaKnown RBP13.66□□□□□ -0.22
SCARB1-205ENST00000538291 MYO7BQ6PIF6 2116 aa13.66□□□□□ -0.22
SCARB1-205ENST00000538291 IGFL4Q6B9Z1 124 aa13.65□□□□□ -0.22
SCARB1-205ENST00000538291 FOXL2NBQ6ZUU3 175 aa13.65□□□□□ -0.22
SCARB1-205ENST00000538291 LTBP1Q14766 1721 aa13.65□□□□□ -0.22
SCARB1-205ENST00000538291 NTF4P34130 210 aa13.65□□□□□ -0.22
SCARB1-205ENST00000538291 ZNF562Q6V9R5 426 aa13.65□□□□□ -0.22
SCARB1-205ENST00000538291 CSTL1Q9H114 145 aa13.65□□□□□ -0.22
SCARB1-205ENST00000538291 AMBPP02760 352 aa13.65□□□□□ -0.22
SCARB1-205ENST00000538291 RNASE2P10153 161 aaKnown RBP13.65□□□□□ -0.22
SCARB1-205ENST00000538291 IGHV1-69DA0A0B4J2H0 117 aa13.65□□□□□ -0.23
SCARB1-205ENST00000538291 A0A1B0GV72 72 aa13.65□□□□□ -0.23
SCARB1-205ENST00000538291 IGHV1-69P01742 117 aa13.65□□□□□ -0.23
SCARB1-205ENST00000538291 HSD52Q0P140 79 aa13.65□□□□□ -0.23
SCARB1-205ENST00000538291 DERL1Q9BUN8 251 aa13.65□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BKO60814 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BJP06899 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BOP23527 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BBP33778 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BDP58876 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BCP62807 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST2H2BEQ16778 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BHQ93079 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BNQ99877 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 HIST1H2BMQ99879 126 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 LINC01619G3V211 115 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 DEFB104AQ8WTQ1 72 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 DICER1Q9UPY3 1922 aaKnown RBP13.64□□□□□ -0.23
SCARB1-205ENST00000538291 Q6ZS49 121 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 ZNF479Q96JC4 524 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 MAPK1IP1LQ8NDC0 245 aa13.64□□□□□ -0.23
SCARB1-205ENST00000538291 FAM110DQ8TAY7 271 aaPredicted RBP13.64□□□□□ -0.23
SCARB1-205ENST00000538291 ROS1P08922 2347 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 TRBV24-1A0A075B6N3 115 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 A8MWV9 139 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 NPC2P61916 151 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 LINC01551Q86U37 167 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 ITGB1BP1O14713 200 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 FNDC4Q9H6D8 234 aaPredicted RBP13.63□□□□□ -0.23
SCARB1-205ENST00000538291 TRAV13-1A0A0B4J241 112 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 LAMTOR3Q9UHA4 124 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 LY96Q9Y6Y9 160 aa13.63□□□□□ -0.23
SCARB1-205ENST00000538291 IGFL3Q6UXB1 125 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 ATP6V0E1O15342 81 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 CR1LQ2VPA4 569 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 GLRX5Q86SX6 157 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 SHANK2-AS3Q9BTD1 123 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 GSN-AS1Q9NRJ2 163 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 TRAV8-4A0A0B4J246 113 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 FNDC10F2Z333 226 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 IGKV1-16P04430 117 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 C5orf24Q7Z6I8 188 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 CADP27708 2225 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 FREM3P0C091 2139 aa13.62□□□□□ -0.23
SCARB1-205ENST00000538291 DIDO1Q9BTC0 2240 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms