RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 LYZL1Q6UWQ5 148 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 HS3ST6Q96QI5 342 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 PSG8Q9UQ74 426 aa4.41□□□□□ -1.7
PTPRD-213ENST00000537002 SPXQ9BT56 116 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 IGKV3D-15A0A087WSY6 115 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 C21orf140B9A014 251 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 IGKV3-15P01624 115 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 COX6A1P12074 109 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 DUTP33316 252 aaKnown RBP4.4□□□□□ -1.7
PTPRD-213ENST00000537002 FOXA2Q9Y261 457 aaPredicted RBP4.4□□□□□ -1.7
PTPRD-213ENST00000537002 TRBV20-1A0A075B6N2 111 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 CD69Q07108 199 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 PCOLCEQ15113 449 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 POU2AF1Q16633 256 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 ZC2HC1BQ5TFG8 222 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 C20orf204Q6ZNR8 217 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 C16orf92Q96LL3 132 aa4.4□□□□□ -1.7
PTPRD-213ENST00000537002 TCRBV4S1A1TA0A5B7 111 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 TCRAP04437 139 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 ANXA2RQ3ZCQ2 193 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 AMTNQ6UX39 209 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 TNRC6AQ8NDV7 1962 aaKnown RBP4.4□□□□□ -1.71
PTPRD-213ENST00000537002 LINC00473A8K010 186 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 B5MCH6 92 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 WISP1O95388 367 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 PPDPFLQ8WWR9 84 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 IGHV3-64A0A075B6Q5 118 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 TEX48A0A1B0GUV7 120 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 WISP2O76076 250 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 PRR20EP86478 221 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 PRR20CP86479 221 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 PRR20DP86480 221 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 PRR20BP86481 221 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 PRR20AP86496 221 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 MEIG1Q5JSS6 88 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 FAM216BQ8N7L0 139 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 DEFB104AQ8WTQ1 72 aa4.4□□□□□ -1.71
PTPRD-213ENST00000537002 TRAV26-1A0A087WT03 109 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 CELA3BP08861 270 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 PRCDQ00LT1 54 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 PRSS33Q8NF86 280 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 OR10J6PQ8NGY7 276 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 TET1Q8NFU7 2136 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 TRBV6-1A0A0K0K1D8 114 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 FOXF2Q12947 444 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 ZNF56Q15929 161 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 FAM90A1Q86YD7 464 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 KIR2DL4Q99706 377 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 PHF3Q92576 2039 aaKnown RBP4.39□□□□□ -1.71
PTPRD-213ENST00000537002 PPP1R32Q7Z5V6 425 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 CLUHP3Q96NS8 147 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 FAM110AQ9BQ89 295 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 TM2D2Q9BX73 214 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 PATE3B3GLJ2 98 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 HAX1O00165 279 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 PRRG2O14669 202 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 VDAC2P45880 294 aaPredicted RBP4.39□□□□□ -1.71
PTPRD-213ENST00000537002 EXOC3-AS1Q8N2X6 119 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 OSR1Q8TAX0 266 aaPredicted RBP4.39□□□□□ -1.71
PTPRD-213ENST00000537002 GTSF1Q8WW33 167 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 RAB1BQ9H0U4 201 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 MFAP4P55083 255 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 ZNF747Q9BV97 191 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 NXT2Q9NPJ8 142 aaKnown RBP4.39□□□□□ -1.71
PTPRD-213ENST00000537002 ERG28Q9UKR5 140 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 KLF12Q9Y4X4 402 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 AMN1Q8IY45 258 aa4.39□□□□□ -1.71
PTPRD-213ENST00000537002 NPC2P61916 151 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 PRR7Q8TB68 274 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 IGHV3-49A0A0A0MS15 119 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 TRAV40A0A0B4J280 105 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 PSG7Q13046 419 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 ASCL5Q7RTU5 278 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 SMIM20Q8N5G0 67 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 CACNA1DQ01668 2161 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 INS-IGF2F8WCM5 200 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 ARMS2P0C7Q2 107 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 C10orf55Q5SWW7 151 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 Q6Q795 121 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 MED12LQ86YW9 2145 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 GATD1Q8NB37 220 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 TMEM158Q8WZ71 300 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 GAGE12JA6NER3 117 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 E9PLD3 99 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 GAGE7O76087 117 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 GAGE12FP0CL80 117 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 GAGE12GP0CL81 117 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 GAGE12IP0CL82 117 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 GAGE4Q13068 117 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 MLANAQ16655 118 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 RSPO1Q2MKA7 263 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-213ENST00000537002 LINC00173Q6ZV60 143 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 Q86TA4 180 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 C1QTNF4Q9BXJ3 329 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 TMEM126AQ9H061 195 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 SPANXB1Q9NS25 103 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-213ENST00000537002 C9JAW5 83 aa4.38□□□□□ -1.71
PTPRD-213ENST00000537002 M0QXV9 152 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms