RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 RPL7P18124 248 aaKnown RBP10.67□□□□□ -0.7
SMG6-203ENST00000536871 GATA3P23771 443 aa10.67□□□□□ -0.7
SMG6-203ENST00000536871 ATP5J2P56134 94 aa10.67□□□□□ -0.7
SMG6-203ENST00000536871 OR8I2Q8N0Y5 310 aa10.67□□□□□ -0.7
SMG6-203ENST00000536871 MIEN1Q9BRT3 115 aa10.67□□□□□ -0.7
SMG6-203ENST00000536871 RNASE7Q9H1E1 156 aaKnown RBP10.67□□□□□ -0.7
SMG6-203ENST00000536871 SERTAD4Q9NUC0 356 aa10.67□□□□□ -0.7
SMG6-203ENST00000536871 HIVEP3Q5T1R4 2406 aa10.67□□□□□ -0.7
SMG6-203ENST00000536871 COL6A6A6NMZ7 2263 aa10.67□□□□□ -0.7
SMG6-203ENST00000536871 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 EGR2P11161 476 aaPredicted RBP10.66□□□□□ -0.7
SMG6-203ENST00000536871 CDKN1BP46527 198 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 COL5A1-AS1Q5SY13 56 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 WIPF2Q8TF74 440 aaPredicted RBP10.66□□□□□ -0.7
SMG6-203ENST00000536871 MLST8Q9BVC4 326 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 MEGF9Q9H1U4 602 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 ZNF586Q9NXT0 402 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 NAT8BQ9UHF3 227 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 NAGKQ9UJ70 344 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 FBXL7Q9UJT9 491 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 MOB4Q9Y3A3 225 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 SOX21Q9Y651 276 aaPredicted RBP10.66□□□□□ -0.7
SMG6-203ENST00000536871 NBEAQ8NFP9 2946 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 NCOR2Q9Y618 2525 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 NAV3Q8IVL0 2385 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 FAM231BA6NCW3 169 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 AMY1AP04745 511 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 PSG9Q00887 426 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 UNQ5815/PRO19632Q6UWF5 114 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 ATP5L2Q7Z4Y8 100 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 TSKUQ8WUA8 353 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 MBD6Q96DN6 1003 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 TMUB1Q9BVT8 246 aa10.66□□□□□ -0.7
SMG6-203ENST00000536871 MRPL18Q9H0U6 180 aaKnown RBP10.66□□□□□ -0.7
SMG6-203ENST00000536871 PIEZO1Q92508 2521 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 BMPR1BO00238 502 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 ZNF253O75346 499 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 CRIP2P52943 208 aaPredicted RBP10.65□□□□□ -0.7
SMG6-203ENST00000536871 KLF17Q5JT82 389 aaPredicted RBP10.65□□□□□ -0.7
SMG6-203ENST00000536871 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 NUDT10Q8NFP7 164 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 OR4B1Q8NGF8 309 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 NUDT11Q96G61 164 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 GFRA4Q9GZZ7 299 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 AAMDCQ9H7C9 122 aa10.65□□□□□ -0.7
SMG6-203ENST00000536871 ZNF331Q9NQX6 463 aaPredicted RBP10.65□□□□□ -0.7
SMG6-203ENST00000536871 CACNA1AO00555 2505 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 A8MWL6 223 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 SNURFLB1AK76 121 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 F8W735 103 aaPredicted RBP10.64□□□□□ -0.71
SMG6-203ENST00000536871 OR2J3O76001 311 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 SLC25A16P16260 332 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 FAM120AOSQ5T036 256 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 TEX43Q6ZNM6 134 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 C5orf56Q8N8D9 126 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 DAZAP1Q96EP5 407 aaKnown RBP10.64□□□□□ -0.71
SMG6-203ENST00000536871 LINC00479Q96M42 142 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 C7orf69Q9H7B7 122 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 RABAC1Q9UI14 185 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 TRBV7-1A0A0A6YYK4 115 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 TRAV34A0A0B4J273 112 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 IGHV4-61A0A0C4DH41 118 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 K7EP13 123 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 IER3P46695 156 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 GNG5P63218 68 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 Q0VG73 95 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 FBLN7Q53RD9 439 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 LEMD1Q68G75 181 aa10.64□□□□□ -0.71
SMG6-203ENST00000536871 MRPS12O15235 138 aaKnown RBP10.63□□□□□ -0.71
SMG6-203ENST00000536871 ATP6V0E1O15342 81 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 BRI3O95415 125 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 P01737 135 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 MSMBP08118 114 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 CRISP2P16562 243 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 CBLN1P23435 193 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 ADMP35318 185 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 CSN1S1P47710 185 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 RBX1P62877 108 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 DMRTA1Q5VZB9 504 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 OR2D3Q8NGH3 330 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 ZNF502Q8TBZ5 544 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 ORAOV1Q8WV07 137 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 EEF1AKMT3Q96AZ1 226 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 PRSS22Q9GZN4 317 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 RPP21Q9H633 154 aaKnown RBP10.63□□□□□ -0.71
SMG6-203ENST00000536871 NBASA2RRP1 2371 aa10.63□□□□□ -0.71
SMG6-203ENST00000536871 B4DSR2 109 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 CTSGP08311 255 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 ESDP10768 282 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 OR10J3Q5JRS4 329 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 SIGLEC15Q6ZMC9 328 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 Q86TA4 180 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 ZNF414Q96IQ9 312 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 HSPB9Q9BQS6 159 aa10.62□□□□□ -0.71
SMG6-203ENST00000536871 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 SCGB1D1O95968 90 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 RHOGP84095 191 aa10.61□□□□□ -0.71
SMG6-203ENST00000536871 ECSCRQ19T08 205 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms