RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GOLT1AQ6ZVE7 132 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 NPBQ8NG41 125 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 RAB1BQ9H0U4 201 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 TRAV8-1A0A0A6YYK1 113 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 FAM90A27PA6NNH2 459 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 OR4F17Q8NGA8 305 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 NDFIP1Q9BT67 221 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 ZFP30Q9Y2G7 519 aa12.68□□□□□ -0.38
CHMP1A-202ENST00000535997 A6NNC1 897 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 GRNP28799 593 aaKnown RBP12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 ARF6P62330 175 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 PRNTQ86SH4 94 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 CIARTQ8N365 385 aaPredicted RBP12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 ZNF491Q8N8L2 437 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 CFHR4Q92496 578 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 C2orf70A6NJV1 201 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 H3BRN7 92 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 HAX1O00165 279 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 NDUFA3O95167 84 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 C16orf54Q6UWD8 224 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 S100A7AQ86SG5 101 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 CHCHD1Q96BP2 118 aaKnown RBP12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 TIMD4Q96H15 378 aa12.67□□□□□ -0.38
CHMP1A-202ENST00000535997 LRBAP50851 2863 aa12.66□□□□□ -0.38
CHMP1A-202ENST00000535997 TRAV30A0A087WSZ9 112 aa12.66□□□□□ -0.38
CHMP1A-202ENST00000535997 K7EQM0 130 aa12.66□□□□□ -0.38
CHMP1A-202ENST00000535997 TMEM75Q8N9X5 138 aa12.66□□□□□ -0.38
CHMP1A-202ENST00000535997 URB1-AS1Q96HZ7 61 aa12.66□□□□□ -0.38
CHMP1A-202ENST00000535997 HILPDAQ9Y5L2 63 aa12.66□□□□□ -0.38
CHMP1A-202ENST00000535997 SPTA1P02549 2419 aa12.66□□□□□ -0.38
CHMP1A-202ENST00000535997 M0R1W7 72 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 ZNF25P17030 456 aaPredicted RBP12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 LCN12Q6JVE5 192 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 RNF125Q96EQ8 232 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 C20orf202A1L168 122 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 CCL21O00585 134 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 CHEK1O14757 476 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 PRTN3P24158 256 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 SIGLEC15Q6ZMC9 328 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 TXN2Q99757 166 aa12.65□□□□□ -0.38
CHMP1A-202ENST00000535997 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 WI2-2373I1.2A0A1W2PRP0 233 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 APOHP02749 345 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 G0S2P27469 103 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 COL5A1-AS1Q5SY13 56 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 C17orf77Q96MU5 243 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 ZNF785A8K8V0 405 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 CRXO43186 299 aaPredicted RBP12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 IL4P05112 153 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 C5orf64Q2M2E5 130 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 CYB5R2Q6BCY4 276 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 Q6ZN92 141 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 TMEM70Q9BUB7 260 aa12.64□□□□□ -0.39
CHMP1A-202ENST00000535997 LOC105371242A0A075B767 164 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 ODF3BA8MYP8 253 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 MRPS12O15235 138 aaKnown RBP12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 LINC00614P0C842 121 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 Q56UQ5 140 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 ZNF562Q6V9R5 426 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 ZNF414Q96IQ9 312 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 ZNF48Q96MX3 618 aaPredicted RBP12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 TMEM208Q9BTX3 173 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 ARHGAP32A7KAX9 2087 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 GNG7O60262 68 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 TOX4O94842 621 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 HLA-DRB1P01911 266 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 FCGR2BP31994 310 aaPredicted RBP12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 BATFQ16520 125 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 PSG3Q16557 428 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 ATOH7Q8N100 152 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 ZC2HC1AQ96GY0 325 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 LPAR2Q9HBW0 351 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 PSG8Q9UQ74 426 aa12.63□□□□□ -0.39
CHMP1A-202ENST00000535997 DCHS2Q6V1P9 2916 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 A0A1B0GUT8 65 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 NPIPB5A8MRT5 1133 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 LY6HO94772 140 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 HNRNPA3P51991 378 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 MFAP4P55083 255 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 GAGE1Q13065 139 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 PDE6HQ13956 83 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 C1orf122Q6ZSJ8 110 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 C1RLQ9NZP8 487 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 OVOL3O00110 214 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 CD24P25063 80 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 HES1Q14469 280 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 KLF17Q5JT82 389 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 NEU4Q8WWR8 484 aaPredicted RBP12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 FANCD2OSQ96PS1 177 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 LAMTOR2Q9Y2Q5 125 aa12.62□□□□□ -0.39
CHMP1A-202ENST00000535997 IGLV11-55A0A075B6I3 123 aa12.61□□□□□ -0.39
CHMP1A-202ENST00000535997 A0A1B0GW15 77 aa12.61□□□□□ -0.39
CHMP1A-202ENST00000535997 DLEU1O43261 78 aa12.61□□□□□ -0.39
CHMP1A-202ENST00000535997 OR5AL1P0C617 328 aa12.61□□□□□ -0.39
CHMP1A-202ENST00000535997 MAJINQ3KP22 176 aa12.61□□□□□ -0.39
CHMP1A-202ENST00000535997 MRPS16Q9Y3D3 137 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms