RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
LINC01089-204ENST00000535643 FAM103A1Q9BTL3 118 aaKnown RBP9.47□□□□□ -0.89
LINC01089-204ENST00000535643 DSCAML1Q8TD84 2053 aa9.47□□□□□ -0.89
LINC01089-204ENST00000535643 IGKV1D-17A0A075B6S4 117 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 TRAV3A0A0B4J244 114 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 A0A1W2PN81 502 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 FAM231BA6NCW3 169 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 E7EQL1 145 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 H0YJW9 148 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 CRXO43186 299 aaPredicted RBP9.46□□□□□ -0.9
LINC01089-204ENST00000535643 OR7C2O60412 319 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 HSBP1O75506 76 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 FOXH1O75593 365 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 NDUFB8O95169 186 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 OR5AL1P0C617 328 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 CD33P20138 364 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 RPL39P5Q59GN2 51 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 OR4A5Q8NH83 315 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 RCHY1Q96PM5 261 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 FAM234AQ9H0X4 552 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 NGBQ9NPG2 151 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 RNF114Q9Y508 228 aa9.46□□□□□ -0.9
LINC01089-204ENST00000535643 TRAV30A0A087WSZ9 112 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 IGHV2OR16-5A0A0B4J2B6 119 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 KBTBD11-OT1A0A1B0GTJ5 212 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 PSMB11A5LHX3 300 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 FAM181BA6NEQ2 426 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 J3QR06 171 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 HLA-DRB1P01911 266 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 MSMBP08118 114 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 TNFSF4P23510 183 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 GATA4P43694 442 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 CDKN1BP46527 198 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 EDDM3AQ14507 147 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 FAM53AQ6NSI3 398 aaPredicted RBP9.45□□□□□ -0.9
LINC01089-204ENST00000535643 OSR1Q8TAX0 266 aaPredicted RBP9.45□□□□□ -0.9
LINC01089-204ENST00000535643 GFRA4Q9GZZ7 299 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 RNASE7Q9H1E1 156 aaKnown RBP9.45□□□□□ -0.9
LINC01089-204ENST00000535643 ZNF492Q9P255 531 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 DUSP13Q9UII6 198 aa9.45□□□□□ -0.9
LINC01089-204ENST00000535643 IGHV2-70DA0A0C4DH43 119 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 IGLC7A0M8Q6 106 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 CLPSL1A2RUU4 121 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 C22orf46C9J442 243 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 SAA2P0DJI9 122 aaPredicted RBP9.44□□□□□ -0.9
LINC01089-204ENST00000535643 RNASE2P10153 161 aaKnown RBP9.44□□□□□ -0.9
LINC01089-204ENST00000535643 PCP4P48539 62 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
LINC01089-204ENST00000535643 LRRC10Q5BKY1 277 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 FAM71F2Q6NXP2 309 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 MRPL54Q6P161 138 aaKnown RBP9.44□□□□□ -0.9
LINC01089-204ENST00000535643 THAP8Q8NA92 274 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 NHLRC2Q8NBF2 726 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 FAM167A-AS1Q96KT0 104 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 ALKBH7Q9BT30 221 aaPredicted RBP9.44□□□□□ -0.9
LINC01089-204ENST00000535643 CLEC7AQ9BXN2 247 aa9.44□□□□□ -0.9
LINC01089-204ENST00000535643 AMMECR1Q9Y4X0 333 aaPredicted RBP9.44□□□□□ -0.9
LINC01089-204ENST00000535643 M0R2Z0 102 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 PEX7O00628 323 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 LHBP01229 141 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 CECR9P0C854 216 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 MGST1P10620 155 aaKnown RBP9.43□□□□□ -0.9
LINC01089-204ENST00000535643 ERHP84090 104 aaKnown RBP9.43□□□□□ -0.9
LINC01089-204ENST00000535643 RHOGP84095 191 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 C17orf58Q2M2W7 97 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 CT45A1Q5HYN5 189 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 TPRX1Q8N7U7 411 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 CT45A3Q8NHU0 189 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 ZNF596Q8TC21 504 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 TMEM70Q9BUB7 260 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 SLC25A2Q9BXI2 301 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 MS4A6AQ9H2W1 248 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 ZNF430Q9H8G1 570 aaPredicted RBP9.43□□□□□ -0.9
LINC01089-204ENST00000535643 TNFRSF19Q9NS68 423 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 SERTAD4Q9NUC0 356 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 KLF12Q9Y4X4 402 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 ARFGEF3Q5TH69 2177 aa9.43□□□□□ -0.9
LINC01089-204ENST00000535643 WI2-2373I1.2A0A1W2PRP0 233 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 C2orf70A6NJV1 201 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 LYZL6O75951 148 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 ACTL6BO94805 426 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 IGHV3-13P01766 116 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 APOA2P02652 100 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 NHLRC4P0CG21 123 aaPredicted RBP9.42□□□□□ -0.9
LINC01089-204ENST00000535643 TFPI2P48307 235 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 ZNF134P52741 427 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 SUB1P53999 127 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC01089-204ENST00000535643 MFAP2P55001 183 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 LINC00205P59089 165 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 HBBP68871 147 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 PAX2Q02962 417 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 SLAQ13239 276 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 FXYD3Q14802 87 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 KIAA1644Q3SXP7 199 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 ZFAND6Q6FIF0 208 aa9.42□□□□□ -0.9
LINC01089-204ENST00000535643 SLC25A48Q6ZT89 311 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms