RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 NMBP08949 121 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 CBLN1P23435 193 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 BMI1P35226 326 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 KHDC3LQ587J8 217 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 IL34Q6ZMJ4 242 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 GPR82Q96P67 336 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 SCRT1Q9BWW7 348 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 SLC25A2Q9BXI2 301 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 TMEM231Q9H6L2 316 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 TMEM14CQ9P0S9 112 aa10.71□□□□□ -0.69
HIF3A-215ENST00000533145 TRAV5A0A0B4J249 113 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 MAP1LC3B2A6NCE7 125 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 TEX46H3BTG2 121 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 CHEK1O14757 476 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 MRPS12O15235 138 aaKnown RBP10.7□□□□□ -0.7
HIF3A-215ENST00000533145 CXorf1O96002 111 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 HBE1P02100 147 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 CSN3P07498 182 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 RAB14P61106 215 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 CLLU1Q5K131 121 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 ADAMTSL5Q6ZMM2 481 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 BPIFA4PQ86YQ2 179 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 LINC00482Q8N8I6 264 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 SUN5Q8TC36 379 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 SFT2D1Q8WV19 159 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 GLMPQ8WWB7 406 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 ZNF503Q96F45 646 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 GRAMD2BQ96HH9 432 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 MAP1LC3BQ9GZQ8 125 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 OR51M1Q9H341 326 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 WNK1Q9H4A3 2382 aa10.7□□□□□ -0.7
HIF3A-215ENST00000533145 PF4P02776 101 aa10.69□□□□□ -0.7
HIF3A-215ENST00000533145 CD5P06127 495 aa10.69□□□□□ -0.7
HIF3A-215ENST00000533145 FOLR2P14207 255 aa10.69□□□□□ -0.7
HIF3A-215ENST00000533145 RPL7P18124 248 aaKnown RBP10.69□□□□□ -0.7
HIF3A-215ENST00000533145 LEMD1Q68G75 181 aa10.69□□□□□ -0.7
HIF3A-215ENST00000533145 LCN15Q6UWW0 184 aa10.69□□□□□ -0.7
HIF3A-215ENST00000533145 OR8I2Q8N0Y5 310 aa10.69□□□□□ -0.7
HIF3A-215ENST00000533145 ELOVL1Q9BW60 279 aa10.69□□□□□ -0.7
HIF3A-215ENST00000533145 HMGB3O15347 200 aaKnown RBP10.68□□□□□ -0.7
HIF3A-215ENST00000533145 ARL14EPLP0DKL9 152 aa10.68□□□□□ -0.7
HIF3A-215ENST00000533145 GP9P14770 177 aa10.68□□□□□ -0.7
HIF3A-215ENST00000533145 FAM90A2PQ658T7 463 aa10.68□□□□□ -0.7
HIF3A-215ENST00000533145 WFDC9Q8NEX5 89 aa10.68□□□□□ -0.7
HIF3A-215ENST00000533145 PAXXQ9BUH6 204 aa10.68□□□□□ -0.7
HIF3A-215ENST00000533145 TENM1Q9UKZ4 2725 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 IGHV3-49A0A0A0MS15 119 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 M0QZ24 198 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 EIF3GO75821 320 aaKnown RBP eCLIP10.67□□□□□ -0.7
HIF3A-215ENST00000533145 HIST1H1EP10412 219 aaKnown RBP10.67□□□□□ -0.7
HIF3A-215ENST00000533145 EDN2P20800 178 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 GCHFRP30047 84 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 PSMB3P49720 205 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 FXYD5Q96DB9 178 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 TMEM167BQ9NRX6 74 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 SMAD5-AS1Q9Y6J3 95 aa10.67□□□□□ -0.7
HIF3A-215ENST00000533145 IGHV3OR16-13A0A075B7E8 117 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 A0A087X0K7 114 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 IGHV3-74A0A0B4J1X5 117 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 IGHV3-66A0A0C4DH42 116 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 HELTA6NFD8 242 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 OR7C2O60412 319 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 GALR1P47211 349 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 MEOX2P50222 304 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 PPT1P50897 306 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 FGF8P55075 233 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-215ENST00000533145 GUK1Q16774 197 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 SIGLEC15Q6ZMC9 328 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 HRH4Q9H3N8 390 aa10.66□□□□□ -0.7
HIF3A-215ENST00000533145 NBEAP1P0C6P0 100 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 PYYP10082 97 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 CCL20P78556 96 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.7
HIF3A-215ENST00000533145 C17orf77Q96MU5 243 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 TMPRSS5Q9H3S3 457 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 MED9Q9NWA0 146 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 MLXQ9UH92 298 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 ARL2-SNX15V9GYD0 113 aa10.65□□□□□ -0.7
HIF3A-215ENST00000533145 TRBV19A0A075B6N1 114 aa10.64□□□□□ -0.71
HIF3A-215ENST00000533145 TRAV25A0A0B4J276 109 aa10.64□□□□□ -0.71
HIF3A-215ENST00000533145 H3BQ15 152 aa10.64□□□□□ -0.71
HIF3A-215ENST00000533145 ZNF253O75346 499 aa10.64□□□□□ -0.71
HIF3A-215ENST00000533145 INSL3P51460 131 aa10.64□□□□□ -0.71
HIF3A-215ENST00000533145 PDE6HQ13956 83 aa10.64□□□□□ -0.71
HIF3A-215ENST00000533145 TCF24Q7RTU0 167 aa10.64□□□□□ -0.71
HIF3A-215ENST00000533145 ZNF586Q9NXT0 402 aa10.64□□□□□ -0.71
HIF3A-215ENST00000533145 ZNF785A8K8V0 405 aa10.63□□□□□ -0.71
HIF3A-215ENST00000533145 OR10J4P0C629 311 aa10.63□□□□□ -0.71
HIF3A-215ENST00000533145 ATF4P18848 351 aaPredicted RBP10.63□□□□□ -0.71
HIF3A-215ENST00000533145 TAGLN2P37802 199 aaKnown RBP10.63□□□□□ -0.71
HIF3A-215ENST00000533145 UBE2L3P68036 154 aaKnown RBP10.63□□□□□ -0.71
HIF3A-215ENST00000533145 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
HIF3A-215ENST00000533145 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
HIF3A-215ENST00000533145 MCRIP2Q9BUT9 160 aaKnown RBP10.63□□□□□ -0.71
HIF3A-215ENST00000533145 TRAV2A0A0B4J234 112 aa10.62□□□□□ -0.71
HIF3A-215ENST00000533145 A0A1W2PRE2 83 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms