RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 CKS2P33552 79 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 CR1LQ2VPA4 569 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 TMEM116Q8NCL8 245 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 SYS1-DBNDD2H3BUS1 97 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 LY6HO94772 140 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 FOXC1Q12948 553 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 GUSBP1Q15486 140 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 LINC00173Q6ZV60 143 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 ATP5L2Q7Z4Y8 100 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 OR10AG1Q8NH19 301 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 C18orf15Q96N68 181 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 NDFIP1Q9BT67 221 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
NXF1-211ENST00000531709 A0A087X0K7 114 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 J3KRW8 73 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 FBLN7Q53RD9 439 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 RASL11AQ6T310 242 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 MUC3AQ02505 3323 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 IGHV2-26A0A0B4J1V2 119 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 ESDP10768 282 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 SIGLEC9Q9Y336 463 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 OTORQ9NRC9 128 aa9.1□□□□□ -0.95
NXF1-211ENST00000531709 ARMS2P0C7Q2 107 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 PSG8Q9UQ74 426 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 F11RQ9Y624 299 aaKnown RBP9.09□□□□□ -0.95
NXF1-211ENST00000531709 C22orf46C9J442 243 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 RPL11P62913 178 aaKnown RBP9.09□□□□□ -0.95
NXF1-211ENST00000531709 GDF5OSQ5U4N7 250 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 TRGV9Q99603 122 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 IGHV1-3A0A0C4DH29 117 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 TIMM23O14925 209 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 RELQ04864 619 aaPredicted RBP9.09□□□□□ -0.95
NXF1-211ENST00000531709 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 SMIM15Q7Z3B0 74 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 ATRXP46100 2492 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 PCSK5Q92824 1860 aa9.09□□□□□ -0.95
NXF1-211ENST00000531709 LOC400499M0QZD8 3231 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 TOMM40O96008 361 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 CEACAM3P40198 252 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 TM4SF20Q53R12 229 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 IGFL4Q6B9Z1 124 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 Q6ZS92 163 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 C17orf77Q96MU5 243 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 NAA38Q9BRA0 125 aaKnown RBP9.08□□□□□ -0.96
NXF1-211ENST00000531709 NCOR1P1Q9H4R4 102 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 THYN1Q9P016 225 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 IGHV3-49A0A0A0MS15 119 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 IGHV1-24A0A0C4DH33 117 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 IGHV3-66A0A0C4DH42 116 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 OR2J3O76001 311 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 LOXP28300 417 aaPredicted RBP9.08□□□□□ -0.96
NXF1-211ENST00000531709 ECSCRQ19T08 205 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 TEX36Q5VZQ5 186 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 RNF125Q96EQ8 232 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 CTSZQ9UBR2 303 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 SCGB2A2Q13296 93 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 MRPL52Q86TS9 123 aaKnown RBP9.08□□□□□ -0.96
NXF1-211ENST00000531709 UFC1Q9Y3C8 167 aa9.08□□□□□ -0.96
NXF1-211ENST00000531709 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 A0A1B0GWJ7 208 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 APOBEC3AP31941 199 aaPredicted RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 PRELID3AQ96N28 172 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 PRO3102Q9H379 93 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 SOX21Q9Y651 276 aaPredicted RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 COX11Q9Y6N1 276 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 GAGE10A6NGK3 116 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 PAX1P15863 534 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 UBE2V1Q13404 147 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 LINC00322Q6ZN03 302 aaPredicted RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 CHCHD1Q96BP2 118 aaKnown RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 FBLL1A6NHQ2 334 aaKnown RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 LDLRAD2Q5SZI1 272 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 MRPS16Q9Y3D3 137 aaKnown RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 ANKRD11Q6UB99 2663 aaPredicted RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 MUC6Q6W4X9 2439 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 IGLC7A0M8Q6 106 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 NPIPB5A8MRT5 1133 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 PPIFP30405 207 aaKnown RBP9.07□□□□□ -0.96
NXF1-211ENST00000531709 GAGE1Q13065 139 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 Q86TA4 180 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 NUP37Q8NFH4 326 aa9.07□□□□□ -0.96
NXF1-211ENST00000531709 NOTCH3Q9UM47 2321 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 OR2T8A6NH00 312 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 CCL25O15444 150 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 S100A7P31151 101 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 COMPP49747 757 aaPredicted RBP9.06□□□□□ -0.96
NXF1-211ENST00000531709 MFAP4P55083 255 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 GTSF1Q8WW33 167 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 IGKV3-7A0A075B6H7 116 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 GPR183P32249 361 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 ARL3P36405 182 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 IGFL2Q6UWQ7 119 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 D6R8Y8 96 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 TMEM155Q4W5P6 130 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 Q8TAT8 98 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 ORAOV1Q8WV07 137 aa9.06□□□□□ -0.96
NXF1-211ENST00000531709 IGKV1D-37A0A075B6S9 117 aa9.05□□□□□ -0.96
NXF1-211ENST00000531709 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms