RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GDF5OSQ5U4N7 250 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 LINC00322Q6ZN03 302 aaPredicted RBP13.56□□□□□ -0.24
BRCA2-204ENST00000530893 FANCD2OSQ96PS1 177 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 ZFP30Q9Y2G7 519 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 ZZEF1O43149 2961 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 A6NNC1 897 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 SCGB2A1O75556 95 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 CD24P25063 80 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 RBPMS2Q6ZRY4 209 aaKnown RBP13.56□□□□□ -0.24
BRCA2-204ENST00000530893 EXOC3-AS1Q8N2X6 119 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 LINC00469Q8N7U9 141 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 FBXL7Q9UJT9 491 aa13.56□□□□□ -0.24
BRCA2-204ENST00000530893 IGF2RP11717 2491 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 VWC2LB2RUY7 222 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 MRPS12O15235 138 aaKnown RBP13.55□□□□□ -0.24
BRCA2-204ENST00000530893 HLA-DRB1P01911 266 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 CD33P20138 364 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 CDKN1AP38936 164 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 FAM162BQ5T6X4 162 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 SIGLEC15Q6ZMC9 328 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 GOLT1AQ6ZVE7 132 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 ALKBH7Q9BT30 221 aaPredicted RBP13.55□□□□□ -0.24
BRCA2-204ENST00000530893 SIRPDQ9H106 197 aa13.55□□□□□ -0.24
BRCA2-204ENST00000530893 NCBP2LA6PVI3 153 aaKnown RBP13.54□□□□□ -0.24
BRCA2-204ENST00000530893 COL8A1P27658 744 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 CAMPP49913 170 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 C16orf54Q6UWD8 224 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 VN1R17PQ8TDU5 208 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 GTSF1Q8WW33 167 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 ARHGAP32A7KAX9 2087 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 LRBAP50851 2863 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 PMCHP20382 165 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 TCF24Q7RTU0 167 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 MRPL52Q86TS9 123 aaKnown RBP13.54□□□□□ -0.24
BRCA2-204ENST00000530893 ZNF414Q96IQ9 312 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 VAMP8Q9BV40 100 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 C21orf62Q9NYP8 219 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 C1RLQ9NZP8 487 aa13.54□□□□□ -0.24
BRCA2-204ENST00000530893 ABCA1O95477 2261 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 TMEM11P17152 192 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 ZFP36P26651 326 aaKnown RBP13.53□□□□□ -0.24
BRCA2-204ENST00000530893 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
BRCA2-204ENST00000530893 FOXA3P55318 350 aaPredicted RBP13.53□□□□□ -0.24
BRCA2-204ENST00000530893 KRTDAPP60985 99 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 KLF17Q5JT82 389 aaPredicted RBP13.53□□□□□ -0.24
BRCA2-204ENST00000530893 PRNTQ86SH4 94 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 DYNAPQ8N1N2 210 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 ARL6IP6Q8N6S5 226 aa13.53□□□□□ -0.24
BRCA2-204ENST00000530893 TRAV8-1A0A0A6YYK1 113 aa13.52□□□□□ -0.24
BRCA2-204ENST00000530893 SERTM2A0A1B0GWG4 89 aa13.52□□□□□ -0.24
BRCA2-204ENST00000530893 DIRC3C9JPN6 131 aa13.52□□□□□ -0.24
BRCA2-204ENST00000530893 EFNA4P52798 201 aa13.52□□□□□ -0.24
BRCA2-204ENST00000530893 TXN2Q99757 166 aa13.52□□□□□ -0.24
BRCA2-204ENST00000530893 FAM106CPP0CH98 169 aa13.52□□□□□ -0.25
BRCA2-204ENST00000530893 S100A7P31151 101 aa13.52□□□□□ -0.25
BRCA2-204ENST00000530893 NDPQ00604 133 aa13.52□□□□□ -0.25
BRCA2-204ENST00000530893 PSG3Q16557 428 aa13.52□□□□□ -0.25
BRCA2-204ENST00000530893 FBLN7Q53RD9 439 aa13.52□□□□□ -0.25
BRCA2-204ENST00000530893 NIT1Q86X76 327 aa13.52□□□□□ -0.25
BRCA2-204ENST00000530893 OR2D3Q8NGH3 330 aa13.52□□□□□ -0.25
BRCA2-204ENST00000530893 BORCS7Q96B45 105 aa13.52□□□□□ -0.25
BRCA2-204ENST00000530893 IGHV2-70DA0A0C4DH43 119 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 A0A1W2PPR1 153 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 F8W735 103 aaPredicted RBP13.51□□□□□ -0.25
BRCA2-204ENST00000530893 HSBP1O75506 76 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 UBE2E1P51965 193 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 Q56UQ5 140 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 CIARTQ8N365 385 aaPredicted RBP13.51□□□□□ -0.25
BRCA2-204ENST00000530893 AAMDCQ9H7C9 122 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 DCHS2Q6V1P9 2916 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 RELNP78509 3460 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 Q8N976 141 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 PGLYRP4Q96LB8 373 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 C17orf77Q96MU5 243 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 MIEN1Q9BRT3 115 aa13.51□□□□□ -0.25
BRCA2-204ENST00000530893 SSBP4Q9BWG4 385 aaPredicted RBP13.51□□□□□ -0.25
BRCA2-204ENST00000530893 HRNRQ86YZ3 2850 aaPredicted RBP13.5□□□□□ -0.25
BRCA2-204ENST00000530893 HAX1O00165 279 aa13.5□□□□□ -0.25
BRCA2-204ENST00000530893 TOX4O94842 621 aa13.5□□□□□ -0.25
BRCA2-204ENST00000530893 PSG9Q00887 426 aa13.5□□□□□ -0.25
BRCA2-204ENST00000530893 PSG8Q9UQ74 426 aa13.5□□□□□ -0.25
BRCA2-204ENST00000530893 IGHV7-81A0A0B4J1V7 117 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 M0R143 59 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 DMRTA1Q5VZB9 504 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 RNF114Q9Y508 228 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 TACC2O95359 2948 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 A0A1B0GV90 55 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 FBLL1A6NHQ2 334 aaKnown RBP13.49□□□□□ -0.25
BRCA2-204ENST00000530893 C3orf79P0CE67 100 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 RPL7P18124 248 aaKnown RBP13.49□□□□□ -0.25
BRCA2-204ENST00000530893 RAB4AP20338 218 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 KLK9Q2XQG4 91 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 TDRG1Q3Y452 100 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 CYB5R2Q6BCY4 276 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 Q8N9W7 124 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 ZC2HC1AQ96GY0 325 aa13.49□□□□□ -0.25
BRCA2-204ENST00000530893 UBTD1Q9HAC8 227 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms