RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 TRAPPC2LQ9UL33 140 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 MED31Q9Y3C7 131 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 LHFPL6Q9Y693 200 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 COL4A2P08572 1712 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 ALPK2Q86TB3 2170 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 SETD5Q9C0A6 1442 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 PXDNLA1KZ92 1463 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 CEP164Q9UPV0 1460 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 MYH9P35579 1960 aaKnown RBP1.05□□□□□ -2.24
FGFR1-235ENST00000530701 KIAA1549Q9HCM3 1950 aa1.05□□□□□ -2.24
FGFR1-235ENST00000530701 DOCK10Q96BY6 2186 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 BAZ2BQ9UIF8 2168 aaKnown RBP1.04□□□□□ -2.24
FGFR1-235ENST00000530701 BRWD1Q9NSI6 2320 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 STRCQ7RTU9 1775 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 BORCS7-ASMTA0A0B4J1R7 106 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 TRAV3A0A0B4J244 114 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 C5orf58C9J3I9 102 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 KPNA4O00629 521 aaPredicted RBP1.04□□□□□ -2.24
FGFR1-235ENST00000530701 DEGS1O15121 323 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 LYRM1O43325 122 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 DHFRP00374 187 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 CLPSP04118 112 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 RAB5CP51148 216 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 POLR2HP52434 150 aaKnown RBP1.04□□□□□ -2.24
FGFR1-235ENST00000530701 LSM3P62310 102 aaKnown RBP1.04□□□□□ -2.24
FGFR1-235ENST00000530701 RPS28P62857 69 aaKnown RBP1.04□□□□□ -2.24
FGFR1-235ENST00000530701 KLRD1Q13241 179 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 HES1Q14469 280 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 TMEM229BQ8NBD8 167 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 ST6GALNAC3Q8NDV1 305 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 OR4B1Q8NGF8 309 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 C4orf3Q8WVX3 66 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 CHCHD1Q96BP2 118 aaKnown RBP1.04□□□□□ -2.24
FGFR1-235ENST00000530701 TMEM106BQ9NUM4 274 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 GSKIPQ9P0R6 139 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 MYH13Q9UKX3 1938 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 BCL9O00512 1426 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 INTS1Q8N201 2190 aaKnown RBP1.04□□□□□ -2.24
FGFR1-235ENST00000530701 GLI3P10071 1580 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 SMARCA4P51532 1647 aa1.04□□□□□ -2.24
FGFR1-235ENST00000530701 PLXNA4Q9HCM2 1894 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 OR2T8A6NH00 312 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 M0R233 179 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 OVOL1O14753 267 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 MIFP14174 115 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 GPX2P18283 190 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 CMPK1P30085 196 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 BRS3P32247 399 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 SRP9P49458 86 aaKnown RBP1.03□□□□□ -2.24
FGFR1-235ENST00000530701 Q1T7F1 81 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 VMA21Q3ZAQ7 101 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 C2orf82Q6UX34 121 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 LINC00305Q7Z4B0 112 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 COA5Q86WW8 74 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 OR8I2Q8N0Y5 310 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 LINC00311Q8N616 119 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 OR5D14Q8NGL3 314 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 OR5H6Q8NGV6 325 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 RNASE11Q8TAA1 199 aaKnown RBP1.03□□□□□ -2.24
FGFR1-235ENST00000530701 ZNF431Q8TF32 576 aaPredicted RBP1.03□□□□□ -2.24
FGFR1-235ENST00000530701 ZNF418Q8TF45 676 aaPredicted RBP1.03□□□□□ -2.24
FGFR1-235ENST00000530701 SFT2D1Q8WV19 159 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 BORCS5Q969J3 196 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 AP1S3Q96PC3 154 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 TMEM138Q9NPI0 162 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 OTORQ9NRC9 128 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 CALML5Q9NZT1 146 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 RNF11Q9Y3C5 154 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 DISP1Q96F81 1524 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 CEP152O94986 1710 aa1.03□□□□□ -2.24
FGFR1-235ENST00000530701 COL5A1P20908 1838 aaPredicted RBP1.03□□□□□ -2.25
FGFR1-235ENST00000530701 MYH6P13533 1939 aa1.03□□□□□ -2.25
FGFR1-235ENST00000530701 EXPH5Q8NEV8 1989 aa1.03□□□□□ -2.25
FGFR1-235ENST00000530701 CR1P17927 2039 aa1.03□□□□□ -2.25
FGFR1-235ENST00000530701 ARFGEF3Q5TH69 2177 aa1.03□□□□□ -2.25
FGFR1-235ENST00000530701 POLEQ07864 2286 aa1.03□□□□□ -2.25
FGFR1-235ENST00000530701 TRAV36DV7A0A075B6V5 113 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 TRAV13-1A0A0B4J241 112 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 IGHV1-58A0A0C4DH39 117 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 TMEM189A5PLL7 270 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 KRTAP9-6A8MVA2 160 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 K7ERJ3 54 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 ARHGEF10O15013 1369 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 OR1I1O60431 355 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 DPM2O94777 84 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 A2MP01023 1474 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 RPL7P18124 248 aaKnown RBP1.02□□□□□ -2.25
FGFR1-235ENST00000530701 SSR2P43308 183 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 MRPS36P82909 103 aaKnown RBP1.02□□□□□ -2.25
FGFR1-235ENST00000530701 CDK6Q00534 326 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 CIRBPQ14011 172 aaKnown RBP1.02□□□□□ -2.25
FGFR1-235ENST00000530701 ZNF846Q147U1 533 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 OR8B8Q15620 311 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 HRCT1Q6UXD1 115 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 FP248Q71RG6 208 aaPredicted RBP1.02□□□□□ -2.25
FGFR1-235ENST00000530701 PHF5AQ7RTV0 110 aaKnown RBP1.02□□□□□ -2.25
FGFR1-235ENST00000530701 FAM216BQ8N7L0 139 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 TNRC6AQ8NDV7 1962 aaKnown RBP1.02□□□□□ -2.25
FGFR1-235ENST00000530701 PRELID3AQ96N28 172 aa1.02□□□□□ -2.25
FGFR1-235ENST00000530701 RETNLBQ9BQ08 111 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms