RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TMEM158Q8WZ71 300 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 NPIPB3Q92617 1050 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 TAF15Q92804 592 aaKnown RBP eCLIP2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 ODF3Q96PU9 254 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 GPX7Q96SL4 187 aaPredicted RBP2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 PLA2G2FQ9BZM2 168 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 FAM60AQ9NP50 221 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 NHP2Q9NX24 153 aaKnown RBP2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 TCF19Q9Y242 345 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 PKIGQ9Y2B9 76 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 ARID1AO14497 2285 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 COL18A1P39060 1754 aa2.92□□□□□ -1.94
CLNS1A-209ENST00000527299 TNS1Q9HBL0 1735 aaKnown RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 THADAQ6YHU6 1953 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 TRAV27A0A087WT01 109 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 A0A0A6YYD4 124 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 FAM236DA0A1B0GTK5 79 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 FAM240AA0A1B0GVK7 77 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 RBAKDNA6NC62 111 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 C15orf62A8K5M9 175 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 C17orf51A8MQB3 221 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 EPM2AB3EWF7 344 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 NDUFC2-KCTD14E9PQ53 114 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 TMEM178BH3BS89 294 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 LMX1BO60663 402 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 FCGR3BO75015 233 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 NDUFC2O95298 119 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 RENP00797 406 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 IGKV1D-33P01593 117 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 IGKV1-33P01594 117 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 TRACP01848 142 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 FRMD6-AS1P0C7T7 363 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 ASAH2BP0C7U1 165 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 SCGB1C2P0DMR2 95 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 FAM236CP0DP71 79 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 PFN2P35080 140 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 RPL13AP40429 203 aaKnown RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 TNFRSF4P43489 277 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 FOXA3P55318 350 aaPredicted RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 CD164Q04900 197 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 ARFRP1Q13795 201 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 IZUMO4Q1ZYL8 232 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 VWC2Q2TAL6 325 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 ZNF672Q499Z4 452 aaPredicted RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 PIK3CD-AS1Q5SR53 167 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 MRPL2Q5T653 305 aaKnown RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 Q6ZQT7 251 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 LINC00173Q6ZV60 143 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 Q71RC1 249 aaPredicted RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 RPS19BP1Q86WX3 136 aaKnown RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 EXOC3-AS1Q8N2X6 119 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 POM121L12Q8N7R1 296 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 C3orf56Q8N813 242 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 PFN4Q8NHR9 129 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 FAM57AQ8TBR7 257 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 CHAC1Q9BUX1 264 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 LIME1Q9H400 295 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 SLC25A22Q9H936 323 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 C20orf141Q9NUB4 165 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 IL36RNQ9UBH0 155 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 PHF3Q92576 2039 aaKnown RBP2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 ATG2BQ96BY7 2078 aa2.91□□□□□ -1.94
CLNS1A-209ENST00000527299 LTBP1Q14766 1721 aa2.9□□□□□ -1.94
CLNS1A-209ENST00000527299 DOCK7Q96N67 2140 aa2.9□□□□□ -1.94
CLNS1A-209ENST00000527299 TRAV2A0A0B4J234 112 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 TRAV8-2A0A0B4J237 113 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 TRAV8-4A0A0B4J246 113 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 A0A0J9YW62 118 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 A0A1B0GTH9 108 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 A0A1B0GVT2 93 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 C16orf97H3BN30 126 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 K7EM74 188 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 K7ERJ3 54 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 PLPP1O14494 284 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 C1orf105O95561 183 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 OXTP01178 125 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 CD7P09564 240 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM90A15PP0C7V4 464 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM90A14PP0C7W9 464 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 PIRTP0C851 137 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 P0DMU3 169 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM231AP0DMU4 169 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM231CP0DMU5 169 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 MGST1P10620 155 aaKnown RBP2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 GCHFRP30047 84 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 SSR4P51571 173 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 CCL11P51671 97 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 KRTAP10-3P60369 221 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 UBE2D3P61077 147 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 UBE2D2P62837 147 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 ADORA2A-AS1P86434 159 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 LINC01620Q4KN68 170 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 ZNF493Q6ZR52 646 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 Q6ZSR3 168 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 SLC25A48Q6ZT89 311 aaKnown RBP2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 FAM231DQ6ZW35 169 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 AAED1Q7RTV5 226 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 C6orf201Q7Z4U5 140 aa2.9□□□□□ -1.95
CLNS1A-209ENST00000527299 STHQ8IWL8 128 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms