RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 S4R3C0 116 aa12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 K7EN84 100 aa12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 TOMM40O96008 361 aa12.71□□□□□ -0.37
SNRNP35-204ENST00000527158 USP9YO00507 2555 aaPredicted RBP12.71□□□□□ -0.38
SNRNP35-204ENST00000527158 ANKRD17O75179 2603 aaKnown RBP12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 KIR2DL5BA0A0G2JN68 375 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 KIR2DL5BA0A0G2JPC4 375 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 PYYP10082 97 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 LY6EQ16553 131 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 PRSS57Q6UWY2 283 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 KIR2DL5AQ8N109 375 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 PSMG3-AS1Q96PY0 264 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 V9GYV3 84 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 VPS13CQ709C8 3753 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 A6NDX4 124 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 LINC01548A6NM66 108 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 M0QZK8 103 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 ISLRO14498 428 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 TMEM256Q8N2U0 113 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 VN1R17PQ8TDU5 208 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 TXN2Q99757 166 aa12.7□□□□□ -0.38
SNRNP35-204ENST00000527158 AMY1AP04745 511 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 IGHV4-31P0DP07 118 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 SUMO1P63165 101 aaKnown RBP12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 KLK9Q2XQG4 91 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 CENPWQ5EE01 88 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 KLK9Q9UKQ9 250 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 A0A1B0GV90 55 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 G3V318 75 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 S100A7AQ86SG5 101 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 FXYD5Q96DB9 178 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 Q96MF0 132 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 MRPL27Q9P0M9 148 aaKnown RBP12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
SNRNP35-204ENST00000527158 IL4P05112 153 aa12.68□□□□□ -0.38
SNRNP35-204ENST00000527158 CBLN1P23435 193 aa12.68□□□□□ -0.38
SNRNP35-204ENST00000527158 RNF125Q96EQ8 232 aa12.68□□□□□ -0.38
SNRNP35-204ENST00000527158 SLC25A39Q9BZJ4 359 aaPredicted RBP12.68□□□□□ -0.38
SNRNP35-204ENST00000527158 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
SNRNP35-204ENST00000527158 TRAV41A0A0B4J266 112 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 GGTLC3B5MD39 225 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 F8W735 103 aaPredicted RBP12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 IGHV3-23P01764 117 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 HNF1AP20823 631 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 CRYBB3P26998 211 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 FCGR2BP31994 310 aaPredicted RBP12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 RHOGP84095 191 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 C15orf32Q32M92 178 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 OR10J3Q5JRS4 329 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 ZNF491Q8N8L2 437 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 CELSR2Q9HCU4 2923 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 OR2T8A6NH00 312 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 SLC17A3O00476 420 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 BAGE3Q86Y29 109 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 BAGE2Q86Y30 109 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 PTPN13Q12923 2485 aa12.67□□□□□ -0.38
SNRNP35-204ENST00000527158 WI2-2373I1.2A0A1W2PRP0 233 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 SNURFLB1AK76 121 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 CRIP2P52943 208 aaPredicted RBP12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 LEMD1Q68G75 181 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 CHRDL1Q9BU40 450 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 ABCA1O95477 2261 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 ZNF705FA8MVS1 300 aaPredicted RBP12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 M0R143 59 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 HLA-DQA1P01909 254 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 NBEAP1P0C6P0 100 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 ZNF705DP0CH99 300 aaPredicted RBP12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 ZNF705BP0CI00 300 aaPredicted RBP12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 IER3P46695 156 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 BLNKQ8WV28 456 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 POLQO75417 2590 aa12.66□□□□□ -0.38
SNRNP35-204ENST00000527158 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 CTSGP08311 255 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 GP9P14770 177 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 DEFB112Q30KQ8 113 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 HIST2H2BCQ6DN03 193 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 OR8I2Q8N0Y5 310 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 C20orf144Q9BQM9 153 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 SHANK2-AS3Q9BTD1 123 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 CDC42EP3Q9UKI2 254 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 CENPEQ02224 2701 aa12.65□□□□□ -0.38
SNRNP35-204ENST00000527158 SERF1AO75920 110 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 IGF1P05019 195 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 CYB5R2Q6BCY4 276 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 ZNF502Q8TBZ5 544 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 EEF1AKMT3Q96AZ1 226 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 CSMD2Q7Z408 3487 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 SMIM27A0A1W2PRY6 76 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 GRIFINA4D1Z8 144 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 NUPR1O60356 82 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 IGHG2P01859 326 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 SNRPCP09234 159 aaKnown RBP12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 TMEM183BQ1AE95 376 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 FAM231DQ6ZW35 169 aa12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 BCL6BQ8N143 479 aaPredicted RBP12.64□□□□□ -0.39
SNRNP35-204ENST00000527158 IGF2BP2-AS1Q96M15 143 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms