RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 MRPL27Q9P0M9 148 aaKnown RBP11.23□□□□□ -0.61
LRRK1-202ENST00000525284 PTPRZ1P23471 2315 aaPredicted RBP11.23□□□□□ -0.61
LRRK1-202ENST00000525284 COL11A2P13942 1736 aaPredicted RBP11.23□□□□□ -0.61
LRRK1-202ENST00000525284 MSRB2Q9Y3D2 182 aa11.23□□□□□ -0.61
LRRK1-202ENST00000525284 IGHV4-28A0A0C4DH34 117 aa11.23□□□□□ -0.61
LRRK1-202ENST00000525284 A0A1B0GTI1 187 aa11.23□□□□□ -0.61
LRRK1-202ENST00000525284 FAM90A1Q86YD7 464 aa11.23□□□□□ -0.61
LRRK1-202ENST00000525284 COL11A1P12107 1806 aaPredicted RBP11.22□□□□□ -0.61
LRRK1-202ENST00000525284 ZNF638Q14966 1978 aaKnown RBP11.22□□□□□ -0.61
LRRK1-202ENST00000525284 IGHV1-2P23083 117 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 LY6G6FQ5SQ64 297 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 SPSB3Q6PJ21 355 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 SIGLEC12Q96PQ1 595 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 C1QTNF5Q9BXJ0 243 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 ZNF497Q6ZNH5 498 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 LINC00477Q96M19 166 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 QSER1Q2KHR3 1735 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 POLR3KQ9Y2Y1 108 aaPredicted RBP11.22□□□□□ -0.61
LRRK1-202ENST00000525284 KLHDC3Q9BQ90 382 aa11.22□□□□□ -0.61
LRRK1-202ENST00000525284 K7EP34 96 aa11.21□□□□□ -0.61
LRRK1-202ENST00000525284 TRPT1Q86TN4 253 aaKnown RBP11.21□□□□□ -0.61
LRRK1-202ENST00000525284 BRK1Q8WUW1 75 aa11.21□□□□□ -0.61
LRRK1-202ENST00000525284 C4orf51C9J302 202 aa11.21□□□□□ -0.61
LRRK1-202ENST00000525284 HGFACQ04756 655 aa11.21□□□□□ -0.61
LRRK1-202ENST00000525284 FAM104BQ5XKR9 115 aa11.21□□□□□ -0.61
LRRK1-202ENST00000525284 H3BMG7 143 aa11.21□□□□□ -0.62
LRRK1-202ENST00000525284 F5H768 121 aa11.21□□□□□ -0.62
LRRK1-202ENST00000525284 DKK1O94907 266 aa11.21□□□□□ -0.62
LRRK1-202ENST00000525284 PPP1R32Q7Z5V6 425 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 GLRX5Q86SX6 157 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 SPTSSBQ8NFR3 76 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 ID3Q02535 119 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 APC2O95996 2303 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 K7ERJ3 54 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 MIA3Q5JRA6 1907 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 TGFBR3LH3BV60 316 aa11.2□□□□□ -0.62
LRRK1-202ENST00000525284 ZNF837Q96EG3 531 aaPredicted RBP11.2□□□□□ -0.62
LRRK1-202ENST00000525284 PRSS29PA6NIE9 313 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 C9orf139Q6ZV77 190 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 C3orf56Q8N813 242 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 TRBV25-1A0A075B6N4 114 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 SLC25A45Q8N413 288 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 OR11H6Q8NGC7 330 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 ITGBL1O95965 494 aaPredicted RBP11.19□□□□□ -0.62
LRRK1-202ENST00000525284 IGHV4-4A0A075B6R2 117 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 RHODO00212 210 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 MYO7AQ13402 2215 aa11.19□□□□□ -0.62
LRRK1-202ENST00000525284 C22orf46C9J442 243 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 NTN5Q8WTR8 489 aaPredicted RBP11.18□□□□□ -0.62
LRRK1-202ENST00000525284 COL4A5P29400 1685 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 ARMS2P0C7Q2 107 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 THBDP07204 575 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 BTCP35070 178 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 SUPT4H1P63272 117 aaKnown RBP11.18□□□□□ -0.62
LRRK1-202ENST00000525284 Q71RC1 249 aaPredicted RBP11.18□□□□□ -0.62
LRRK1-202ENST00000525284 PRO1854Q9UHT4 67 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 A0A1B0GWJ7 208 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 SPANXCQ9NY87 97 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 TMEM213A2RRL7 107 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 LINC00271P0C7V0 271 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 LAIR2Q6ISS4 152 aa11.18□□□□□ -0.62
LRRK1-202ENST00000525284 IGKV1-5P01602 117 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 MRPL23Q16540 153 aaKnown RBP11.17□□□□□ -0.62
LRRK1-202ENST00000525284 A0A1W2PPM0 123 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 RNASE2P10153 161 aaKnown RBP11.17□□□□□ -0.62
LRRK1-202ENST00000525284 C2orf66Q6UXQ4 117 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 OTOFQ9HC10 1997 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 CFHR2P36980 270 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 UBE2BP63146 152 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 VMO1Q7Z5L0 202 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 PIP4P2Q8N4L2 257 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 TMEM141Q96I45 108 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 NDUFA12Q9UI09 145 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 CACNA1DQ01668 2161 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 A0A1B0GUS0 222 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 TRPM6Q9BX84 2022 aa11.17□□□□□ -0.62
LRRK1-202ENST00000525284 POLR2AP24928 1970 aaKnown RBP11.16□□□□□ -0.62
LRRK1-202ENST00000525284 TRAV13-2A0A0B4J235 113 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 IGLC2P0DOY2 106 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 IGLC3P0DOY3 106 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 F6UB75 175 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 SEC61GP60059 68 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 CEND1Q8N111 149 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 WBP1Q96G27 269 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 I3L3M4 83 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 ZNF329Q86UD4 541 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 IGHV2-26A0A0B4J1V2 119 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 TIAF1O95411 115 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 RPP25LQ8N5L8 163 aaKnown RBP11.16□□□□□ -0.62
LRRK1-202ENST00000525284 TRGV9Q99603 122 aa11.16□□□□□ -0.62
LRRK1-202ENST00000525284 MP68P56378 58 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 IL17RELQ6ZVW7 336 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 UNC13CQ8NB66 2214 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 TRAV3A0A0B4J244 114 aa11.15□□□□□ -0.62
LRRK1-202ENST00000525284 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms