RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 J3QLI3 93 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BKO60814 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BJP06899 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BOP23527 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BBP33778 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 NDUFA6P56556 154 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BDP58876 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BCP62807 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 BLCAPP62952 87 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST2H2BEQ16778 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 TMEM183BQ1AE95 376 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.89□□□□□ -0.51
BEST1-204ENST00000524926 CMTM2Q8TAZ6 248 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BHQ93079 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BNQ99877 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 HIST1H2BMQ99879 126 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 IL36BQ9NZH7 164 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 RABAC1Q9UI14 185 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 M0QZK8 103 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 TCRAP04437 139 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 TRGC1P0CF51 173 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 IGLC2P0DOY2 106 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 ATP5G2Q06055 141 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 IBA57Q5T440 356 aaKnown RBP11.89□□□□□ -0.51
BEST1-204ENST00000524926 LRRC75A-AS1Q8N1F1 130 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 SERTAD4Q9NUC0 356 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 GAR1Q9NY12 217 aaKnown RBP11.89□□□□□ -0.51
BEST1-204ENST00000524926 V9GYV3 84 aa11.89□□□□□ -0.51
BEST1-204ENST00000524926 BMPR1BO00238 502 aa11.88□□□□□ -0.51
BEST1-204ENST00000524926 DEFB112Q30KQ8 113 aa11.88□□□□□ -0.51
BEST1-204ENST00000524926 NOL4LQ96MY1 436 aaPredicted RBP11.88□□□□□ -0.51
BEST1-204ENST00000524926 OSTCQ9NRP0 149 aa11.88□□□□□ -0.51
BEST1-204ENST00000524926 NAV2Q8IVL1 2488 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 TRBV7-1A0A0A6YYK4 115 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 UBE2CO00762 179 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 MRPS12O15235 138 aaKnown RBP11.87□□□□□ -0.51
BEST1-204ENST00000524926 IGHG2P01859 326 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 TRGV3P03979 118 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 TYMSP04818 313 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 IGF1P05019 195 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 CRIP2P52943 208 aaPredicted RBP11.87□□□□□ -0.51
BEST1-204ENST00000524926 RPEL1Q2QD12 228 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 TOMM20LQ6UXN7 152 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 BTF3L4Q96K17 158 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 Q96MF0 132 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 KLF12Q9Y4X4 402 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 CHD6Q8TD26 2715 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 PRR27Q6MZM9 219 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
BEST1-204ENST00000524926 DOPEY2Q9Y3R5 2298 aa11.86□□□□□ -0.51
BEST1-204ENST00000524926 Q6ZS46 218 aa11.86□□□□□ -0.51
BEST1-204ENST00000524926 FMC1Q96HJ9 113 aa11.86□□□□□ -0.51
BEST1-204ENST00000524926 GPR82Q96P67 336 aa11.86□□□□□ -0.51
BEST1-204ENST00000524926 ZNF705GA8MUZ8 300 aaPredicted RBP11.86□□□□□ -0.51
BEST1-204ENST00000524926 PHOX2AO14813 284 aa11.86□□□□□ -0.51
BEST1-204ENST00000524926 IGHV4-59P01825 116 aa11.86□□□□□ -0.51
BEST1-204ENST00000524926 S100A9P06702 114 aaKnown RBP11.86□□□□□ -0.51
BEST1-204ENST00000524926 RPL7P18124 248 aaKnown RBP11.86□□□□□ -0.51
BEST1-204ENST00000524926 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
BEST1-204ENST00000524926 HIST2H2BCQ6DN03 193 aa11.86□□□□□ -0.51
BEST1-204ENST00000524926 SIGLEC15Q6ZMC9 328 aa11.86□□□□□ -0.51
BEST1-204ENST00000524926 FAM223BA6NKX1 122 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 J3QKU1 62 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 PLA2G2AP14555 144 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 TPPP2P59282 170 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 GOLT1AQ6ZVE7 132 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 FAM223AQ8IWN6 122 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 LYPD1Q8N2G4 141 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 ZANQ9Y493 2812 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 S100A7P31151 101 aa11.85□□□□□ -0.51
BEST1-204ENST00000524926 CR1P17927 2039 aa11.84□□□□□ -0.51
BEST1-204ENST00000524926 TRAV8-1A0A0A6YYK1 113 aa11.84□□□□□ -0.51
BEST1-204ENST00000524926 PRB4P10163 310 aaPredicted RBP11.84□□□□□ -0.51
BEST1-204ENST00000524926 ZFAND3Q9H8U3 227 aa11.84□□□□□ -0.51
BEST1-204ENST00000524926 TRAPPC1Q9Y5R8 145 aa11.84□□□□□ -0.51
BEST1-204ENST00000524926 CA1P00915 261 aaPredicted RBP11.84□□□□□ -0.51
BEST1-204ENST00000524926 PPIFP30405 207 aaKnown RBP11.84□□□□□ -0.51
BEST1-204ENST00000524926 TCL1AP56279 114 aa11.84□□□□□ -0.51
BEST1-204ENST00000524926 ACTL10Q5JWF8 245 aa11.84□□□□□ -0.51
BEST1-204ENST00000524926 AAMDCQ9H7C9 122 aa11.84□□□□□ -0.51
BEST1-204ENST00000524926 LTAP01374 205 aa11.83□□□□□ -0.52
BEST1-204ENST00000524926 RELQ04864 619 aaPredicted RBP11.83□□□□□ -0.52
BEST1-204ENST00000524926 PDE6HQ13956 83 aa11.83□□□□□ -0.52
BEST1-204ENST00000524926 NUDT10Q8NFP7 164 aa11.83□□□□□ -0.52
BEST1-204ENST00000524926 NUDT11Q96G61 164 aa11.83□□□□□ -0.52
BEST1-204ENST00000524926 TRAV9-1A0A075B6T8 112 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 M0R3E3 92 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 GATCO43716 136 aaKnown RBP11.82□□□□□ -0.52
BEST1-204ENST00000524926 SPINK4O60575 86 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 PF4V1P10720 104 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 HOXA5P20719 270 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 PRNTQ86SH4 94 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 SMIM12Q96EX1 92 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 MLST8Q9BVC4 326 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 TENM4Q6N022 2769 aa11.82□□□□□ -0.52
BEST1-204ENST00000524926 APCP25054 2843 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms