RNA–Protein interactions for RNA: ENST00000521260.1

NPM1-207, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-207ENST00000521260 NXT2Q9NPJ8 142 aaKnown RBP4.15□□□□□ -1.75
NPM1-207ENST00000521260 CCL28Q9NRJ3 127 aa4.15□□□□□ -1.75
NPM1-207ENST00000521260 LSM7Q9UK45 103 aaKnown RBP4.15□□□□□ -1.75
NPM1-207ENST00000521260 SELENOKQ9Y6D0 94 aa4.15□□□□□ -1.75
NPM1-207ENST00000521260 TRGV11A0A075B6L2 103 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 TRAV17A0A0B4J275 112 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 A0A0J9YW62 118 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 TRBV10-2A0A0K0K1G8 114 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 A0A1B0GUT8 65 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 RBAKDNA6NC62 111 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 J3QQQ9 107 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 CLDN14O95500 239 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 IGLV2-8P01709 118 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 IGLV3-1P01715 115 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 FOXA3P55318 350 aaPredicted RBP4.14□□□□□ -1.75
NPM1-207ENST00000521260 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
NPM1-207ENST00000521260 SRSF9Q13242 221 aaKnown RBP eCLIP4.14□□□□□ -1.75
NPM1-207ENST00000521260 ZNF56Q15929 161 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 VMA21Q3ZAQ7 101 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 TMEM155Q4W5P6 130 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 C22orf39Q6P5X5 142 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 ZNF493Q6ZR52 646 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 Q6ZT83 130 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 LINC00173Q6ZV60 143 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 ORMDL3Q8N138 153 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 FGFRL1Q8N441 504 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 ZNF488Q96MN9 340 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 SPACA5Q96QH8 159 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 RTL8AQ9BWD3 113 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 TP73-AS1Q9UF72 201 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 AMMECR1Q9Y4X0 333 aaPredicted RBP4.14□□□□□ -1.75
NPM1-207ENST00000521260 SERP1Q9Y6X1 66 aa4.14□□□□□ -1.75
NPM1-207ENST00000521260 TRBV7-3A0A075B6L6 115 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 SMIM26A0A096LP01 95 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.13□□□□□ -1.75
NPM1-207ENST00000521260 IGKV1-9A0A0C4DH69 117 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 A0A1W2PQD3 144 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 TMEM202A6NGA9 273 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 PLAUP00749 431 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 PRSS1P07477 247 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 FRMD6-AS1P0C7T7 363 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 FKBP2P26885 142 aaKnown RBP4.13□□□□□ -1.75
NPM1-207ENST00000521260 UBE2D1P51668 147 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 CD164Q04900 197 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 C4orf26Q17RF5 130 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 DEFB121Q5J5C9 76 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 PAPPA-AS1Q5QFB9 102 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 FAM201AQ5SY85 155 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 Q5XG85 94 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 Q6ZVL8 140 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 GTSCR1Q86UQ5 136 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 MKXQ8IYA7 352 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 UBALD1Q8TB05 177 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 CYYR1Q96J86 154 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 ODF3Q96PU9 254 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 PYGO1Q9Y3Y4 419 aa4.13□□□□□ -1.75
NPM1-207ENST00000521260 TIMM8BQ9Y5J9 83 aaPredicted RBP4.13□□□□□ -1.75
NPM1-207ENST00000521260 TRIP12Q14669 1992 aaPredicted RBP4.13□□□□□ -1.75
NPM1-207ENST00000521260 TRGV8A0A0C4DH27 118 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 PGPA6NDG6 321 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 K7EQS6 105 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 PEX7O00628 323 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 CDX4O14627 284 aaPredicted RBP4.12□□□□□ -1.75
NPM1-207ENST00000521260 PRRG2O14669 202 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 IGKV1-5P01602 117 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 LINC00271P0C7V0 271 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 B4GALT1P15291 398 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 CA6P23280 308 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 TIRAPP58753 221 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 PCBD1P61457 104 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 HERVK_113P61574 105 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 ZNF542PQ5EBM4 170 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 ZC2HC1BQ5TFG8 222 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 FAM90A1Q86YD7 464 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 SERP2Q8N6R1 65 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 SCAMP4Q969E2 229 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 FAM173AQ9BQD7 235 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 SHANK2-AS3Q9BTD1 123 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 PLA2G2FQ9BZM2 168 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 PRSS22Q9GZN4 317 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 PRO1854Q9UHT4 67 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 LINC00527Q9UJ94 153 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 COL4A3Q01955 1670 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 COL4A2P08572 1712 aa4.12□□□□□ -1.75
NPM1-207ENST00000521260 A0A0G2JRQ6 117 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 TRBV6-1A0A0K0K1D8 114 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 A0A1W2PRX2 142 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 LINC01546A6NGU7 62 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 KNCNA6PVL3 124 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 TMEM150CB9EJG8 249 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 LYZL6O75951 148 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 TCL1BO95988 128 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 NGFP01138 241 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 LTAP01374 205 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 COL8A2P25067 703 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 LEPP41159 167 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 TNFRSF4P43489 277 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 SSR4P51571 173 aa4.11□□□□□ -1.75
NPM1-207ENST00000521260 SUB1P53999 127 aaKnown RBP eCLIP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms