RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 SSR2P43308 183 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 ARPC4P59998 168 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 RPS28P62857 69 aaKnown RBP1.74□□□□□ -2.13
PTPN12-214ENST00000520947 MSMO1Q15800 293 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 RNASE10Q5GAN6 216 aaKnown RBP1.74□□□□□ -2.13
PTPN12-214ENST00000520947 ST6GALNAC3Q8NDV1 305 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 ZNF418Q8TF45 676 aaPredicted RBP1.74□□□□□ -2.13
PTPN12-214ENST00000520947 MCEEQ96PE7 176 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 CACYBPQ9HB71 228 aaKnown RBP1.74□□□□□ -2.13
PTPN12-214ENST00000520947 OR5AC2Q9NZP5 309 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 NAT8BQ9UHF3 227 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 LY96Q9Y6Y9 160 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 UBR2Q8IWV8 1755 aa1.74□□□□□ -2.13
PTPN12-214ENST00000520947 TRAV3A0A0B4J244 114 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 TRAV12-1A0A0B4J245 112 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 A0A1B0GX51 115 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 C17orf112F2Z3M2 114 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 KPNA4O00629 521 aaPredicted RBP1.73□□□□□ -2.13
PTPN12-214ENST00000520947 DHFRP00374 187 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 CRPP02741 224 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 OR10J4P0C629 311 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 SDC2P34741 201 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 NDUFA6P56556 154 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 KLRD1Q13241 179 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 PDE6HQ13956 83 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 COA5Q86WW8 74 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 LINC00311Q8N616 119 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 RETNLBQ9BQ08 111 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 RNF11Q9Y3C5 154 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 SOX21Q9Y651 276 aaPredicted RBP1.73□□□□□ -2.13
PTPN12-214ENST00000520947 SBF1O95248 1867 aa1.73□□□□□ -2.13
PTPN12-214ENST00000520947 RTL9Q8NET4 1388 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 ZCCHC6Q5VYS8 1495 aaKnown RBP1.72□□□□□ -2.13
PTPN12-214ENST00000520947 TRBV7-6A0A0J9YX20 115 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 K7ERJ3 54 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 RER1O15258 196 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 OR1I1O60431 355 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 LYZL6O75951 148 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 GPX1P07203 203 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 RPS3P23396 243 aaKnown RBP eCLIP1.72□□□□□ -2.13
PTPN12-214ENST00000520947 BRS3P32247 399 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 SARNPP82979 210 aaKnown RBP1.72□□□□□ -2.13
PTPN12-214ENST00000520947 PSG9Q00887 426 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 CCDC153Q494R4 210 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 FP248Q71RG6 208 aaPredicted RBP1.72□□□□□ -2.13
PTPN12-214ENST00000520947 Q8IYB0 196 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 OR4K15Q8NH41 348 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 TAS2R7Q9NYW3 318 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 DOCK10Q96BY6 2186 aa1.72□□□□□ -2.13
PTPN12-214ENST00000520947 ARHGEF11O15085 1522 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 MYH11P35749 1972 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 TRAV36DV7A0A075B6V5 113 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 TRAV14DV4A0A0A6YYC5 116 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 BORCS7-ASMTA0A0B4J1R7 106 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 IGHV1-58A0A0C4DH39 117 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 C2orf70A6NJV1 201 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 DEGS1O15121 323 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 FABP2P12104 132 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 ROMO1P60602 79 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 S100A12P80511 92 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 OR8B8Q15620 311 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 HRCT1Q6UXD1 115 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 TMEM254Q8TBM7 123 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 SFT2D1Q8WV19 159 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 ZNF625Q96I27 306 aaPredicted RBP1.71□□□□□ -2.14
PTPN12-214ENST00000520947 LXNQ9BS40 222 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 JPT1Q9UK76 154 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 TRAPPC2LQ9UL33 140 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 MDC1Q14676 2089 aaKnown RBP1.71□□□□□ -2.14
PTPN12-214ENST00000520947 ARHGEF10O15013 1369 aa1.71□□□□□ -2.14
PTPN12-214ENST00000520947 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
PTPN12-214ENST00000520947 A0A087WX48 190 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 OVOS2A0A0G2JMS6 1433 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 KDM6AO15550 1401 aaPredicted RBP1.7□□□□□ -2.14
PTPN12-214ENST00000520947 SRP9P49458 86 aaKnown RBP1.7□□□□□ -2.14
PTPN12-214ENST00000520947 RAB5CP51148 216 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 VMA21Q3ZAQ7 101 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 C10orf55Q5SWW7 151 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 TNS3Q68CZ2 1445 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 C4orf22Q6V702 233 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 Q6ZRN7 208 aaPredicted RBP1.7□□□□□ -2.14
PTPN12-214ENST00000520947 TMEM229BQ8NBD8 167 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 OR5D14Q8NGL3 314 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 CHCHD1Q96BP2 118 aaKnown RBP1.7□□□□□ -2.14
PTPN12-214ENST00000520947 RASL12Q9NYN1 266 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 KIAA1107Q9UPP5 1409 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 KIAA2026Q5HYC2 2103 aa1.7□□□□□ -2.14
PTPN12-214ENST00000520947 A2MP01023 1474 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 TCOF1Q13428 1488 aaKnown RBP1.69□□□□□ -2.14
PTPN12-214ENST00000520947 OBSL1O75147 1896 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 MUC6Q6W4X9 2439 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 FRMPD1Q5SYB0 1578 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 TRBV6-5A0A0K0K1A5 114 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 LYRM1O43325 122 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 DBIP07108 87 aaKnown RBP1.69□□□□□ -2.14
PTPN12-214ENST00000520947 SMCO1Q147U7 214 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 C2orf82Q6UX34 121 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 OR8I2Q8N0Y5 310 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 FAM216BQ8N7L0 139 aa1.69□□□□□ -2.14
PTPN12-214ENST00000520947 OR4B1Q8NGF8 309 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms