RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 OR4C6Q8NH72 309 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 THEM6Q8WUY1 208 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 DYDC1Q8WWB3 177 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 ANP32BQ92688 251 aaKnown RBP1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 OR2H1Q9GZK4 316 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 C6orf62Q9GZU0 229 aaPredicted RBP1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 MED11Q9P086 117 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 NDUFAF1Q9Y375 327 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 MYH2Q9UKX2 1941 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 CCDC88AQ3V6T2 1871 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 PBRM1Q86U86 1689 aa1.2□□□□□ -2.22
RNU6-840P-201ENST00000517275 DOCK4Q8N1I0 1966 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 MED12LQ86YW9 2145 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 MYH7BA7E2Y1 1941 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 TRAV3A0A0B4J244 114 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 H7BYZ3 331 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 ADGRB2O60241 1585 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 HIST1H2BKO60814 126 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 HYPMO75409 117 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 FAM107AO95990 144 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 HIST1H2BJP06899 126 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 CXCL1P09341 107 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 TMBIM6P55061 237 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 CD109Q6YHK3 1445 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 AKAP14Q86UN6 197 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 OR5D16Q8NGK9 328 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 OR2T35Q8NGX2 323 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 RMND5BQ96G75 393 aaPredicted RBP1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 REG4Q9BYZ8 158 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 SPANXA1Q9NS26 97 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 EML6Q6ZMW3 1958 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 UBR2Q8IWV8 1755 aa1.19□□□□□ -2.22
RNU6-840P-201ENST00000517275 NCAPD3P42695 1498 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 CAMSAP2Q08AD1 1489 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 CEP164Q9UPV0 1460 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 MICAL3Q7RTP6 2002 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 UNC13AQ9UPW8 1703 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 TRDV1A0A1B0GX56 115 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 TCRBV4S1A1TA0A5B7 111 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 B4DSR2 109 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 CST7O76096 145 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 IFNA4P05014 189 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 ZNF93P35789 620 aaPredicted RBP1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 RPL35P42766 123 aaKnown RBP1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 RAB5CP51148 216 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 EIF3IQ13347 325 aaKnown RBP1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 C15orf53Q8NAA6 179 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 TMEM254Q8TBM7 123 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 EFCAB11Q9BUY7 163 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 MRPL40Q9NQ50 206 aaKnown RBP1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 NAT8BQ9UHF3 227 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 GINS2Q9Y248 185 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 MYH3P11055 1940 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 NISCHQ9Y2I1 1504 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 RFX7Q2KHR2 1363 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 RTL9Q8NET4 1388 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 TRPM1Q7Z4N2 1603 aa1.18□□□□□ -2.22
RNU6-840P-201ENST00000517275 PCDH15Q96QU1 1955 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 SCN8AQ9UQD0 1980 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 BCL9O00512 1426 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 TRAPPC8Q9Y2L5 1435 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 TRAV27A0A087WT01 109 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 IGKV3D-7A0A0C4DH55 119 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 IGKV3OR2-268A0A0C4DH90 116 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 INE1O15225 51 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 POLR2HP52434 150 aaKnown RBP1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 MSMO1Q15800 293 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 Q8N814 137 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 SKA2Q8WVK7 121 aaPredicted RBP1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 PYDC1Q8WXC3 89 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 CHCHD1Q96BP2 118 aaKnown RBP1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 BORCS8Q96FH0 119 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 HYLS1Q96M11 299 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 MCEEQ96PE7 176 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 TP53RKQ96S44 253 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 TCEAL2Q9H3H9 227 aaPredicted RBP1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 C19orf12Q9NSK7 152 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 RASL12Q9NYN1 266 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 HSPB11Q9Y547 144 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 ANKRD30AQ9BXX3 1397 aa1.17□□□□□ -2.22
RNU6-840P-201ENST00000517275 TECPR2O15040 1411 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 TNS3Q68CZ2 1445 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 IGHV1-58A0A0C4DH39 117 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 TRBV7-6A0A0J9YX20 115 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 TSTD3H0UI37 97 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 RER1O15258 196 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 HCRTO43612 131 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 PSG9Q00887 426 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 CDK5R1Q15078 307 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 C1orf134Q5TEV5 83 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 C4orf22Q6V702 233 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 ZNF833PQ6ZTB9 187 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 IFT20Q8IY31 132 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 CCL4L1Q8NHW4 92 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 PATE1Q8WXA2 126 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 DIRC1Q969H9 104 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 ZNF714Q96N38 554 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 RETNLBQ9BQ08 111 aa1.16□□□□□ -2.22
RNU6-840P-201ENST00000517275 MED31Q9Y3C7 131 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms