RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 VPREB3Q9UKI3 123 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 SNX12Q9UMY4 172 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 PKIGQ9Y2B9 76 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 UTP11Q9Y3A2 253 aaKnown RBP1.77□□□□□ -2.13
HERC4-215ENST00000515753 FAM32AQ9Y421 112 aaKnown RBP1.77□□□□□ -2.13
HERC4-215ENST00000515753 U3KQK5 164 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 CFAP46Q8IYW2 2715 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 RELNP78509 3460 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 UNC79Q9P2D8 2635 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 TLN1Q9Y490 2541 aaKnown RBP1.77□□□□□ -2.13
HERC4-215ENST00000515753 PTPN13Q12923 2485 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 ICE1Q9Y2F5 2266 aa1.77□□□□□ -2.13
HERC4-215ENST00000515753 DOCK4Q8N1I0 1966 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 NYNRINQ9P2P1 1898 aaKnown RBP1.76□□□□□ -2.13
HERC4-215ENST00000515753 NBEAQ8NFP9 2946 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 hADV38S2A0JD32 116 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 GRIFINA4D1Z8 144 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 DPRXA6NFQ7 191 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 B4DSR2 109 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 SLC17A3O00476 420 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 MRPL33O75394 65 aaKnown RBP1.76□□□□□ -2.13
HERC4-215ENST00000515753 IFNA1P01562 189 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 PFN1P07737 140 aaKnown RBP1.76□□□□□ -2.13
HERC4-215ENST00000515753 RPL5P46777 297 aaKnown RBP1.76□□□□□ -2.13
HERC4-215ENST00000515753 EVX1P49640 407 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 NNATQ16517 81 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 LGALSLQ3ZCW2 172 aaPredicted RBP1.76□□□□□ -2.13
HERC4-215ENST00000515753 TNFAIP8L3Q5GJ75 292 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 C3orf33Q6P1S2 294 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 SMARCD3Q6STE5 483 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 TMPPEQ6ZT21 453 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 AKAP14Q86UN6 197 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 GPHB5Q86YW7 130 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 ANKRD29Q8N6D5 301 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 OR8B12Q8NGG6 310 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 C10orf105Q8TEF2 133 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 RAB2BQ8WUD1 216 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 MND1Q9BWT6 205 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 TMEM222Q9H0R3 208 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 C11orf1Q9H5F2 150 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 ENY2Q9NPA8 101 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 SLC35A3Q9Y2D2 325 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 RNF11Q9Y3C5 154 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 TENM4Q6N022 2769 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 USP9XQ93008 2570 aaPredicted RBP1.76□□□□□ -2.13
HERC4-215ENST00000515753 LRRK2Q5S007 2527 aa1.76□□□□□ -2.13
HERC4-215ENST00000515753 ATMQ13315 3056 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 SHANK1Q9Y566 2161 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 SPTAN1Q13813 2472 aaKnown RBP1.75□□□□□ -2.13
HERC4-215ENST00000515753 PIEZO2Q9H5I5 2752 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 A0A096LPI6 279 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 TRAV26-2A0A0B4J265 109 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 A0A0J9YW62 118 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 FAM236DA0A1B0GTK5 79 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 COLCA2A8K830 154 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 A8MUN3 132 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 A8MWP6 167 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 E7EQL1 145 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 H0YJX3 145 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 RPL36A-HNRNPH2H7BZ11 118 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 LST1O00453 97 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 SERPINE1P05121 402 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 FAM236CP0DP71 79 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 IFI30P13284 250 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 HSPE1P61604 102 aaKnown RBP1.75□□□□□ -2.13
HERC4-215ENST00000515753 RBX1P62877 108 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 RUNX1Q01196 453 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 IL15RAQ13261 267 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 DHRS2Q13268 280 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 GRK1Q15835 563 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 ARHGAP11BQ3KRB8 267 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 SMIM15Q7Z3B0 74 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 GRINAQ7Z429 371 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 SLC35F6Q8N357 371 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 GDPD1Q8N9F7 314 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 OR11H6Q8NGC7 330 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 OR4K13Q8NH42 304 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 ZNF563Q8TA94 476 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 GNPDA2Q8TDQ7 276 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 TSPAN32Q96QS1 320 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 UPK3BQ9BT76 320 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 C20orf27Q9GZN8 174 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 SMDT1Q9H4I9 107 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 CACYBPQ9HB71 228 aaKnown RBP1.75□□□□□ -2.13
HERC4-215ENST00000515753 DYNLRB1Q9NP97 96 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 CMTM6Q9NX76 183 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 PCTPQ9UKL6 214 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 PYCARDQ9ULZ3 195 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 ZNF443Q9Y2A4 671 aaPredicted RBP1.75□□□□□ -2.13
HERC4-215ENST00000515753 COL12A1Q99715 3063 aa1.75□□□□□ -2.13
HERC4-215ENST00000515753 ZNF106Q9H2Y7 1883 aaKnown RBP1.75□□□□□ -2.13
HERC4-215ENST00000515753 C2CD3Q4AC94 2353 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 MED13Q9UHV7 2174 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 IGKV1D-37A0A075B6S9 117 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 A0A087WUU8 490 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 A0A096LNT2 108 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 C17orf51A8MQB3 221 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 A8MT66 165 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 M0R233 179 aa1.74□□□□□ -2.13
HERC4-215ENST00000515753 UBE2L6O14933 153 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms