RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FAM110DQ8TAY7 271 aaPredicted RBP6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 RTL8AQ9BWD3 113 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 FZR1Q9UM11 496 aa6.05□□□□□ -1.44
PDLIM5-219ENST00000514743 TRBV9A0A0B4J1U6 114 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 C2orf70A6NJV1 201 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM262E9PQX1 116 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 IGKV3-15P01624 115 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 CRYGDP07320 174 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 COX5AP20674 150 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 MPV17P39210 176 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 AMTNQ6UX39 209 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 Q6ZRM9 215 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 Q6ZT83 130 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 FAM214BQ7L5A3 538 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 C11orf53Q8IXP5 236 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 OR10J6PQ8NGY7 276 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 IL17DQ8TAD2 202 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 AKAP13Q12802 2813 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 ZNF318Q5VUA4 2279 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 PRR14LQ5THK1 2151 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 LY6DQ14210 128 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 KIR3DL3Q8N743 410 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 WDR31Q8NA23 367 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 COQ2Q96H96 371 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 MRPL32Q9BYC8 188 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 TRAV4A0A0B4J268 109 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 FAM236DA0A1B0GTK5 79 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 CHEK1O14757 476 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 FAM236CP0DP71 79 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 IAPPP10997 89 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 INTS1Q8N201 2190 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 TMEM86BQ8N661 226 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 C9orf106Q8NAJ2 232 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 DEFB124Q8NES8 71 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 GTSF1Q8WW33 167 aa6.04□□□□□ -1.44
PDLIM5-219ENST00000514743 CACNA1DQ01668 2161 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 PSPNO60542 156 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 ZG16O60844 167 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 KIR2DS2P43631 304 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 CCL11P51671 97 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 IL17RELQ6ZVW7 336 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 Q8IYB0 196 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 KLF14Q8TD94 323 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 RPRMQ9NS64 109 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 KLK5Q9Y337 293 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 KLF12Q9Y4X4 402 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 YTHDF2Q9Y5A9 579 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 OTOGLQ3ZCN5 2332 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 ATMQ13315 3056 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 ZNF292O60281 2723 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 TRAV9-1A0A075B6T8 112 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 A1L4Q6 167 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 IGKV1-5P01602 117 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 FOXF2Q12947 444 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 Q6ZR03 302 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 TRPT1Q86TN4 253 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 PPDPFLQ8WWR9 84 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 C18orf15Q96N68 181 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 K7ERJ3 54 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 TAS2R45P59539 299 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 FAM53AQ6NSI3 398 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 NFE4Q86UQ8 179 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 OR4X2Q8NGF9 303 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 OR10G8Q8NGN5 311 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 GNB1LQ9BYB4 327 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 VSIRQ9H7M9 311 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 PRO0461Q9UI25 63 aa6.03□□□□□ -1.44
PDLIM5-219ENST00000514743 WNT9BO14905 357 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 FAM27E3Q08E93 113 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 EIF4EBP1Q13541 118 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 SSX8Q7RTT4 187 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 C8orf31Q8N9H6 132 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 GATD1Q8NB37 220 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 SLC25A39Q9BZJ4 359 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 FBXL15Q9H469 300 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 MGAQ8IWI9 3026 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 DSCAML1Q8TD84 2053 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 TFF1P04155 84 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 ZNF688P0C7X2 276 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 GCSHP23434 173 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 CX3CL1P78423 397 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 Q6Q795 121 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 ZNF826PQ6ZT77 177 aa6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 FOXA2Q9Y261 457 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 RAI1Q7Z5J4 1906 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-219ENST00000514743 CGB1A6NKQ9 187 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 GGTLC3B5MD39 225 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 SPINK4O60575 86 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 IGLV1-44P01699 117 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 GRPP07492 148 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 FRMD6-AS1P0C7T7 363 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 CECR9P0C854 216 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 SEM1Q6ZVN7 128 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 CXorf67Q86X51 503 aaPredicted RBP6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 DRAM1Q8N682 238 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 CNEP1R1Q8N9A8 125 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 JPT2Q9H910 190 aa6.01□□□□□ -1.45
PDLIM5-219ENST00000514743 NMUP48645 174 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms