RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 CCSO14618 274 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 CBX5P45973 191 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 TCL1AP56279 114 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 LINC01547P58512 204 aaPredicted RBP5.85□□□□□ -1.47
CLCN3-208ENST00000512813 RPS25P62851 125 aaKnown RBP5.85□□□□□ -1.47
CLCN3-208ENST00000512813 FGL1Q08830 312 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 TOR2AQ5JU69 321 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 C7orf33Q8WU49 177 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 NPIPB3Q92617 1050 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 RMI2Q96E14 147 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 SLC25A32Q9H2D1 315 aa5.85□□□□□ -1.47
CLCN3-208ENST00000512813 AK6Q9Y3D8 172 aaKnown RBP5.85□□□□□ -1.47
CLCN3-208ENST00000512813 TRAV26-2A0A0B4J265 109 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 SSX5O60225 188 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 PTHLHP12272 177 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 RAB6AP20340 208 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 HTR2BP41595 481 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 CDNFQ49AH0 187 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 Q8N3U1 123 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 C9orf163Q8N9P6 203 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 OR1B1Q8NGR6 318 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 RNF185Q96GF1 192 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 MRPL16Q9NX20 251 aaKnown RBP5.84□□□□□ -1.47
CLCN3-208ENST00000512813 KLF12Q9Y4X4 402 aa5.84□□□□□ -1.47
CLCN3-208ENST00000512813 FAM231BA6NCW3 169 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 METTL21EPA6NDL7 271 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 EFCAB10A6NFE3 127 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 H7C1H1 209 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 WBP4O75554 376 aaKnown RBP5.83□□□□□ -1.48
CLCN3-208ENST00000512813 IGKV1-39P01597 117 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 IGKV1D-39P04432 117 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 NAT1P18440 290 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 PSMA1P25786 263 aaKnown RBP5.83□□□□□ -1.48
CLCN3-208ENST00000512813 LYZP61626 148 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 FAM122CQ6P4D5 195 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 SDIM1Q6ZPB5 146 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 RNASEH2CQ8TDP1 164 aaKnown RBP5.83□□□□□ -1.48
CLCN3-208ENST00000512813 ZC2HC1AQ96GY0 325 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 ACY3Q96HD9 319 aa5.83□□□□□ -1.48
CLCN3-208ENST00000512813 PARD6GQ9BYG4 376 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-208ENST00000512813 A0A087WYN8 130 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 TRAV12-3A0A0B4J271 114 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 TAAR5O14804 337 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 PITX3O75364 302 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 FCGR1AP12314 374 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 IZUMO4Q1ZYL8 232 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 ETFRF1Q6IPR1 90 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 ZBTB8BQ8NAP8 495 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-208ENST00000512813 NHLRC2Q8NBF2 726 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 BEST4Q8NFU0 473 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 MRGPRFQ96AM1 343 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 CENPNQ96H22 339 aaPredicted RBP5.82□□□□□ -1.48
CLCN3-208ENST00000512813 TMEM80Q96HE8 168 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 SLC25A22Q9H936 323 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 ENY2Q9NPA8 101 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 POMPQ9Y244 141 aa5.82□□□□□ -1.48
CLCN3-208ENST00000512813 IGKV2D-24A0A075B6R9 120 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 LOC100131303A0A0U1RQF7 123 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 GGTLC3B5MD39 225 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 EI24O14681 340 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 SFTA3P0C7M3 94 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 CXCL3P19876 107 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 GNG2P59768 71 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 HERV-K104P61576 105 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 ANXA2RQ3ZCQ2 193 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 C2orf83Q53S99 150 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 DAZ4Q86SG3 579 aaKnown RBP5.81□□□□□ -1.48
CLCN3-208ENST00000512813 OR4D5Q8NGN0 318 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 ZNF479Q96JC4 524 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 GPR82Q96P67 336 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 PDCD10Q9BUL8 212 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 DAZ3Q9NR90 486 aaKnown RBP5.81□□□□□ -1.48
CLCN3-208ENST00000512813 PSORS1C2Q9UIG4 136 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 PSORS1C1Q9UIG5 152 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 V9GY05 133 aa5.81□□□□□ -1.48
CLCN3-208ENST00000512813 IGKV1OR2-108A0A075B7D4 117 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 HRH1P35367 487 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 GYS2P54840 703 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 ZNF90Q03938 601 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 SRSF9Q13242 221 aaKnown RBP eCLIP5.8□□□□□ -1.48
CLCN3-208ENST00000512813 DGAT2L7PQ6IED9 249 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 STEAP1BQ6NZ63 245 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 DPPA3Q6W0C5 159 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 CCDC190Q86UF4 302 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 ARRDC1Q8N5I2 433 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 SLC35E1Q96K37 410 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 ATG5Q9H1Y0 275 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
CLCN3-208ENST00000512813 MYL12BO14950 172 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 ATG12O94817 140 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 CALB2P22676 271 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 RPL19P84098 196 aaKnown RBP5.79□□□□□ -1.48
CLCN3-208ENST00000512813 NOXA1Q86UR1 476 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 ZNF664Q8N3J9 261 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 EIF4E3Q8N5X7 224 aaKnown RBP5.79□□□□□ -1.48
CLCN3-208ENST00000512813 OR10G4Q8NGN3 311 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 RPUSD4Q96CM3 377 aaKnown RBP5.79□□□□□ -1.48
CLCN3-208ENST00000512813 CCDC90BQ9GZT6 254 aa5.79□□□□□ -1.48
CLCN3-208ENST00000512813 SLC45A2Q9UMX9 530 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms