RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 OR4F17Q8NGA8 305 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 RNF125Q96EQ8 232 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 SGK494Q96LW2 274 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 IGLV11-55A0A075B6I3 123 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 MRPS12O15235 138 aaKnown RBP7.29□□□□□ -1.24
CPNE4-210ENST00000512332 C3orf79P0CE67 100 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 CTRLP40313 264 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 PDE6HQ13956 83 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 EBI3Q14213 229 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 CDSNQ15517 529 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 DTX2Q86UW9 622 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 TTC9CQ8N5M4 171 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 ARL6IP6Q8N6S5 226 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 BORCS7Q96B45 105 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 RPH3ALQ9UNE2 315 aa7.29□□□□□ -1.24
CPNE4-210ENST00000512332 TPRP12270 2363 aaKnown RBP7.28□□□□□ -1.24
CPNE4-210ENST00000512332 CEP295Q9C0D2 2601 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 ABCA4P78363 2273 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 K7EQM0 130 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 HSBP1O75506 76 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 COL8A1P27658 744 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 CAMPP49913 170 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 MINOS1Q5TGZ0 78 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 SIGLEC15Q6ZMC9 328 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 TCF24Q7RTU0 167 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 Q8N6K4 173 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 IGFBPL1Q8WX77 278 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 PAM16Q9Y3D7 125 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 HILPDAQ9Y5L2 63 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 MINOS1-NBL1R4GNA1 71 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 A6NNC1 897 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 H3BTX0 84 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 MFAP4P55083 255 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 PMCHL1Q16048 86 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 ZNF705AQ6ZN79 300 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-210ENST00000512332 GOLT1AQ6ZVE7 132 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 EXOC3-AS1Q8N2X6 119 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 FAM19A2Q8N3H0 131 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 ZNF414Q96IQ9 312 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 FANCD2OSQ96PS1 177 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 NDFIP1Q9BT67 221 aa7.28□□□□□ -1.24
CPNE4-210ENST00000512332 SSBP4Q9BWG4 385 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-210ENST00000512332 KALRNO60229 2985 aa7.27□□□□□ -1.24
CPNE4-210ENST00000512332 SERTM2A0A1B0GWG4 89 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 LY6HO94772 140 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 APOHP02749 345 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-210ENST00000512332 IL4P05112 153 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 RNF224P0DH78 156 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 OR2D3Q8NGH3 330 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 CHCHD1Q96BP2 118 aaKnown RBP7.27□□□□□ -1.25
CPNE4-210ENST00000512332 THYN1Q9P016 225 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 SPTA1P02549 2419 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 TRAV8-1A0A0A6YYK1 113 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 FAM181BA6NEQ2 426 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 ZNF785A8K8V0 405 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 OVOL3O00110 214 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 GNG7O60262 68 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 HLA-DRB1P01911 266 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 PSG3Q16557 428 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 PRNTQ86SH4 94 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 CIARTQ8N365 385 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-210ENST00000512332 GATD1Q8NB37 220 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 ARPC1AQ92747 370 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 PGLYRP4Q96LB8 373 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 RAXQ9Y2V3 346 aa7.27□□□□□ -1.25
CPNE4-210ENST00000512332 A0A1B0GW15 77 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 NTF3P20783 257 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 FCGR2BP31994 310 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-210ENST00000512332 KLRD1Q13241 179 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 HES1Q14469 280 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 KLK9Q2XQG4 91 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 Q6AWC8 147 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 VMO1Q7Z5L0 202 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 KLHDC1Q8N7A1 406 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 C1RLQ9NZP8 487 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 KLK9Q9UKQ9 250 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 PSG8Q9UQ74 426 aa7.26□□□□□ -1.25
CPNE4-210ENST00000512332 LOC102724200A0A096LPH7 203 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-210ENST00000512332 C20orf202A1L168 122 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 FBLL1A6NHQ2 334 aaKnown RBP7.25□□□□□ -1.25
CPNE4-210ENST00000512332 C2orf70A6NJV1 201 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 F8W735 103 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-210ENST00000512332 M0R2Z0 102 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 CRXO43186 299 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-210ENST00000512332 SCGB2A1O75556 95 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 BTF3P20290 206 aaKnown RBP7.25□□□□□ -1.25
CPNE4-210ENST00000512332 SPATA45Q537H7 98 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 COX8CQ7Z4L0 72 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 ZC2HC1AQ96GY0 325 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 URB1-AS1Q96HZ7 61 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 C17orf77Q96MU5 243 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 TXN2Q99757 166 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 C21orf62Q9NYP8 219 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 UQCR10Q9UDW1 63 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 TCAPO15273 167 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 IGLC3P0DOY3 106 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 PSG9Q00887 426 aa7.25□□□□□ -1.25
CPNE4-210ENST00000512332 KLF17Q5JT82 389 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-210ENST00000512332 RNASEKQ6P5S7 137 aaKnown RBP7.25□□□□□ -1.25
CPNE4-210ENST00000512332 AAMDCQ9H7C9 122 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms