RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 PF4P02776 101 aa10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 PRB4P10163 310 aaPredicted RBP10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 ZNF726P1Q15940 193 aa10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 C1orf122Q6ZSJ8 110 aa10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 TMEM190Q8WZ59 177 aa10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 ASIPP42127 132 aa10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 LY96Q9Y6Y9 160 aa10.52□□□□□ -0.73
PCDHA4-202ENST00000512229 NPIPB5A8MRT5 1133 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 USMG5Q96IX5 58 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 PRELID3AQ96N28 172 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 NAV3Q8IVL0 2385 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 ATP6V0E1O15342 81 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 MAPK1IP1LQ8NDC0 245 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 PEMTQ9UBM1 199 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 PSMB11A5LHX3 300 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 NUP210LQ5VU65 1888 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 A0A1W2PRX2 142 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 NUTF2P61970 127 aaKnown RBP10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 LYPD1Q8N2G4 141 aa10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
PCDHA4-202ENST00000512229 HIVEP2P31629 2446 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 M0R3E3 92 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 NDUFB8O95169 186 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 NUDT3O95989 172 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 HERVK_113P61574 105 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 CYB5R2Q6BCY4 276 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 SCGB1D4Q6XE38 83 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 LINC00479Q96M42 142 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 CHD3Q12873 2000 aaKnown RBP10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 IGHV2-5P01817 119 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 GNB1LQ9BYB4 327 aa10.5□□□□□ -0.73
PCDHA4-202ENST00000512229 G3V318 75 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 SERF1AO75920 110 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 ADMP35318 185 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 ORMDL3Q8N138 153 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 SHANK2-AS3Q9BTD1 123 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 WNK1Q9H4A3 2382 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 SRD5A1P18405 259 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 RNASE4P34096 147 aaKnown RBP10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 YPEL3P61236 119 aaPredicted RBP10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 RRN3P1Q2M238 152 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 C22orf34Q6ZV56 151 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 FAM110DQ8TAY7 271 aaPredicted RBP10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 ITLN2Q8WWU7 325 aaPredicted RBP10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 IGKV2-40A0A087WW87 121 aaPredicted RBP10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 IGKV2D-40P01614 121 aaPredicted RBP10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 JMJD8Q96S16 334 aa10.49□□□□□ -0.73
PCDHA4-202ENST00000512229 NDPQ00604 133 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 FAM19A2Q8N3H0 131 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 KLK15Q9H2R5 256 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 NPIPB6E9PJ23 425 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 APOHP02749 345 aaPredicted RBP10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 RNF224P0DH78 156 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 PAX1P15863 534 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 ZNF56Q15929 161 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 LDLRAD2Q5SZI1 272 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 DYSFO75923 2080 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 TRAV21A0A0B4J279 112 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 FAM223BA6NKX1 122 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 Q5PR19 223 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 REC114Q7Z4M0 266 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 FAM223AQ8IWN6 122 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 KCNS1Q96KK3 526 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 KIR2DL4Q99706 377 aa10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 USP9YO00507 2555 aaPredicted RBP10.48□□□□□ -0.73
PCDHA4-202ENST00000512229 OVOL1O14753 267 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 NMUP48645 174 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 CR1LQ2VPA4 569 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 SPATA45Q537H7 98 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 TMEM70Q9BUB7 260 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 HIVEP3Q5T1R4 2406 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 ABCA2Q9BZC7 2435 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 OR11H6Q8NGC7 330 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 FNDC4Q9H6D8 234 aaPredicted RBP10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 TLN2Q9Y4G6 2542 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 PPIFP30405 207 aaKnown RBP10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 CD33P20138 364 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 TCTAP57738 103 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 PRR20EP86478 221 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 PRR20CP86479 221 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 PRR20DP86480 221 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 PRR20BP86481 221 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 PRR20AP86496 221 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 PDE6HQ13956 83 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 LCN12Q6JVE5 192 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 Q6ZPA2 131 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 C9orf139Q6ZV77 190 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 ATOH7Q8N100 152 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
PCDHA4-202ENST00000512229 IGLC7A0M8Q6 106 aa10.46□□□□□ -0.73
PCDHA4-202ENST00000512229 GZMBP10144 247 aa10.46□□□□□ -0.73
PCDHA4-202ENST00000512229 DDTP30046 118 aa10.46□□□□□ -0.73
PCDHA4-202ENST00000512229 FBLN7Q53RD9 439 aa10.46□□□□□ -0.73
PCDHA4-202ENST00000512229 ATP5L2Q7Z4Y8 100 aa10.46□□□□□ -0.73
PCDHA4-202ENST00000512229 DMRT1Q9Y5R6 373 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms