RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 POMPQ9Y244 141 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 WASHC3Q9Y3C0 194 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 HDGFL3Q9Y3E1 203 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 TLN1Q9Y490 2541 aaKnown RBP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 NOTCH2Q04721 2471 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 DOPEY1Q5JWR5 2465 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 AGRNO00468 2067 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 IGHV1-45A0A0A0MS14 117 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 M0R2Z0 102 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 MRPS14O60783 128 aaKnown RBP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 DPM2O94777 84 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 CGAP01215 116 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 PAEPP09466 180 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 RPS3P23396 243 aaKnown RBP eCLIP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 PSMB8P28062 276 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 MPV17P39210 176 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 OPRK1P41145 380 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 EMP1P54849 157 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 NDUFA6P56556 154 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 SMAGPQ0VAQ4 97 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 CST6Q15828 149 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 C12orf74Q32Q52 190 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 Q6ZR03 302 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 TCTE3Q8IZS6 198 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 OR8I2Q8N0Y5 310 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 RPRMLQ8N4K4 120 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 LINC00612Q8N6U2 182 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 RPS4Y2Q8TD47 263 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 S100ZQ8WXG8 99 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 HIST1H2BAQ96A08 127 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ANAPC13Q9BS18 74 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 RTBDNQ9BSG5 229 aaPredicted RBP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 C1orf50Q9BV19 199 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 MRPL32Q9BYC8 188 aaKnown RBP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 COMMD5Q9GZQ3 224 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 BANF2Q9H503 90 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ZNF355PQ9NSJ1 428 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 FBXL12Q9NXK8 326 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 RBM12B-AS1Q9P1G2 102 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 LINC00527Q9UJ94 153 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 BOD1L1Q8NFC6 3051 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 CREBBPQ92793 2442 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 A0A096LNJ9 63 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 TRAV8-1A0A0A6YYK1 113 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 IGHV1-69-2A0A0G2JMI3 117 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 SPTY2D1-AS1A0A0U1RR47 76 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 H3BQF6 201 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 RPL36A-HNRNPH2H7BZ11 118 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ZNF207O43670 478 aaKnown RBP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ARL6IP5O75915 188 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ATP5G1P05496 136 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ZNF708P17019 499 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ELK1P19419 428 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 MAXP61244 160 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 RPS25P62851 125 aaKnown RBP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 DCDP81605 110 aaKnown RBP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 HOXC5Q00444 222 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 SYCNQ0VAF6 134 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 IGFBP7Q16270 282 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 AMMECR1LQ6DCA0 310 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 SPINK14Q6IE38 97 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 NAA40Q86UY6 237 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ZNF584Q8IVC4 421 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 MSRB3Q8IXL7 192 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 ZNF567Q8N184 647 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 C11orf42Q8N5U0 333 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 OR2M3Q8NG83 312 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 OR8B12Q8NGG6 310 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 OR10AC1Q8NH08 325 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 TWIST2Q8WVJ9 160 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 RTN4IP1Q8WWV3 396 aaPredicted RBP1.48□□□□□ -2.17
PDE4D-218ENST00000509368 PP6455Q8WZ26 134 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 MS4A6EQ96DS6 147 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 MCEEQ96PE7 176 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 TRIB3Q96RU7 358 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 CELSR2Q9HCU4 2923 aa1.48□□□□□ -2.17
PDE4D-218ENST00000509368 SCN1AP35498 2009 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 PDZD2O15018 2839 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 CABIN1Q9Y6J0 2220 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 UTP20O75691 2785 aaKnown RBP1.47□□□□□ -2.17
PDE4D-218ENST00000509368 DOPEY2Q9Y3R5 2298 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 TMED7-TICAM2A0A0A6YYA0 188 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 TRAV4A0A0B4J268 109 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 IZUMO1RA6ND01 250 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 C9JAW5 83 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 IGLV3-27P01718 113 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 AZU1P20160 251 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 CRYGSP22914 178 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 HLA-DRB3P79483 266 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 FABP9Q0Z7S8 132 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 NXNL2Q5VZ03 156 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 WDR59Q6PJI9 974 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 FOXI2Q6ZQN5 318 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 LINC01560Q8TB33 94 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 RBPMSQ93062 196 aaKnown RBP1.47□□□□□ -2.17
PDE4D-218ENST00000509368 TP53RKQ96S44 253 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 PRADC1Q9BSG0 188 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 OR2H1Q9GZK4 316 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 TMEM222Q9H0R3 208 aa1.47□□□□□ -2.17
PDE4D-218ENST00000509368 OR2D2Q9H210 308 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms