RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 CEP164Q9UPV0 1460 aa1.82□□□□□ -2.12
TRAPPC13-209ENST00000508304 CACNA1GO43497 2377 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 GLI3P10071 1580 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 OR2T8A6NH00 312 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 C5orf58C9J3I9 102 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 C17orf112F2Z3M2 114 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 J3KT08 172 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 KPNA4O00629 521 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 OVOL1O14753 267 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 DHFRP00374 187 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 SCGB1A1P11684 91 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 C4orf22Q6V702 233 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 ZNF418Q8TF45 676 aaPredicted RBP1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 SFT2D1Q8WV19 159 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 LRTM1Q9HBL6 345 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 OTORQ9NRC9 128 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 MYH7BA7E2Y1 1941 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 PCNX2A6NKB5 2137 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 NUMA1Q14980 2115 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 DISP1Q96F81 1524 aa1.81□□□□□ -2.12
TRAPPC13-209ENST00000508304 SMARCA4P51532 1647 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 TRBV6-5A0A0K0K1A5 114 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 M0R233 179 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 LYRM1O43325 122 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 OR1I1O60431 355 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 RAB5CP51148 216 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 POLR2HP52434 150 aaKnown RBP1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 ARPC4P59998 168 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 C2orf82Q6UX34 121 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 HRCT1Q6UXD1 115 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 CLECL1Q8IZS7 167 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 C9orf163Q8N9P6 203 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 Q96M85 177 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 LXNQ9BS40 222 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 TAF1LQ8IZX4 1826 aa1.8□□□□□ -2.12
TRAPPC13-209ENST00000508304 DENND4CQ5VZ89 1909 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 SCN8AQ9UQD0 1980 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 RPL7P18124 248 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 GTF2A1P52655 376 aaPredicted RBP1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 DEFB103AP81534 67 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 CCDC153Q494R4 210 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 C3orf56Q8N813 242 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 OR4B1Q8NGF8 309 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 OR5H6Q8NGV6 325 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 POP5Q969H6 163 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 MCEEQ96PE7 176 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 RNF11Q9Y3C5 154 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 ZCCHC11Q5TAX3 1644 aaKnown RBP1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 RP1P56715 2156 aa1.79□□□□□ -2.12
TRAPPC13-209ENST00000508304 DOCK10Q96BY6 2186 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 UBR2Q8IWV8 1755 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 ARHGEF28Q8N1W1 1705 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 TRAV12-1A0A0B4J245 112 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 C2orf70A6NJV1 201 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 H7BYZ3 331 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 DEGS1O15121 323 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 CMPK1P30085 196 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 SARNPP82979 210 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 CDK6Q00534 326 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 SMCO1Q147U7 214 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 VMA21Q3ZAQ7 101 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 LINC00305Q7Z4B0 112 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 OR8I2Q8N0Y5 310 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 LRRC18Q8N456 261 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 FAM216BQ8N7L0 139 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 MAFIPQ8WZ33 124 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 MUCL1Q96DR8 90 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 CARD19Q96LW7 228 aa1.78□□□□□ -2.12
TRAPPC13-209ENST00000508304 BRWD1Q9NSI6 2320 aa1.78□□□□□ -2.13
TRAPPC13-209ENST00000508304 NUP210LQ5VU65 1888 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 BAHCC1Q9P281 2608 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 RGS12O14924 1447 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 TRAPPC8Q9Y2L5 1435 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 LOC105371267A0A1B0GV96 52 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 TCRBV4S1A1TA0A5B7 111 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 DEFB113Q30KQ7 82 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 Q8IYB0 196 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 TEX29Q8N6K0 151 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 TMEM229BQ8NBD8 167 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 ZNF431Q8TF32 576 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 C4orf3Q8WVX3 66 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 PRELID3AQ96N28 172 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 AP1S3Q96PC3 154 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 REG4Q9BYZ8 158 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 GSKIPQ9P0R6 139 aa1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 MDC1Q14676 2089 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 FN1P02751 2386 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-209ENST00000508304 BCL9O00512 1426 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 SBF1O95248 1867 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 TRAV13-1A0A0B4J241 112 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 IGHV1-58A0A0C4DH39 117 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 CCDC160A6NGH7 325 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 HYPMO75409 117 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 CD2P06729 351 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 DBIP07108 87 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 CIRBPQ14011 172 aaKnown RBP1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 CDK5R1Q15078 307 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 OR8B8Q15620 311 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 PATE2Q6UY27 113 aa1.76□□□□□ -2.13
TRAPPC13-209ENST00000508304 PHF5AQ7RTV0 110 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms