RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 HIST1H2BCP62807 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST2H2BEQ16778 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.51□□□□□ -1.69
SCLT1-207ENST00000506233 ADAMTSL5Q6ZMM2 481 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 C15orf54Q8N8G6 183 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 OR10G7Q8NGN6 311 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 SFT2D1Q8WV19 159 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST1H2BHQ93079 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST1H2BNQ99877 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 HIST1H2BMQ99879 126 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 PXMP4Q9Y6I8 212 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV4-61A0A0C4DH41 118 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 RNF212BA8MTL3 300 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 IGLC2P0DOY2 106 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 C4BPBP20851 252 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 KIR2DS2P43631 304 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 RAB13P51153 203 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 MEF2BQ02080 365 aaPredicted RBP4.51□□□□□ -1.69
SCLT1-207ENST00000506233 ATP6V1FQ16864 119 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 FFAR4Q5NUL3 377 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 LCN15Q6UWW0 184 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 CYP2G1PQ6ZSU1 146 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 SSX8Q7RTT4 187 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 EPG5Q9HCE0 2579 aa4.51□□□□□ -1.69
SCLT1-207ENST00000506233 CTXND1A0A1B0GTU2 59 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 MAP1LC3B2A6NCE7 125 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 FAM106CPP0CH98 169 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 PRTN3P24158 256 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 DEFA5Q01523 94 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 OR5B3Q8NH48 314 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 NARS2Q96I59 477 aaKnown RBP4.5□□□□□ -1.69
SCLT1-207ENST00000506233 MAP1LC3BQ9GZQ8 125 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 KLF12Q9Y4X4 402 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV2-70DA0A0C4DH43 119 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 TYMSP04818 313 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 RAB14P61106 215 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 ZNF616Q08AN1 781 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 RHEBQ15382 184 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 Q6YL49 198 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 ZNF329Q86UD4 541 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 FAM24BQ8N5W8 94 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 OR4C13Q8NGP0 309 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 SLC39A9Q9NUM3 307 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 PRELID1Q9Y255 219 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 PRRC2AP48634 2157 aaKnown RBP4.5□□□□□ -1.69
SCLT1-207ENST00000506233 TRBV24-1A0A075B6N3 115 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 SLC17A3O00476 420 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 GGCTO75223 188 aaKnown RBP4.5□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV4-31P0DP07 118 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 MED14OSP0DP75 135 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 RAB5AP20339 215 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 Q6ZQT7 251 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 BOD1L2Q8IYS8 172 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 BPESC1Q9GZL8 116 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 GNG13Q9P2W3 67 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 VAX2Q9UIW0 290 aa4.5□□□□□ -1.69
SCLT1-207ENST00000506233 F11RQ9Y624 299 aaKnown RBP4.5□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV4-30-2A0A087WSY4 118 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 NKX6-3A6NJ46 265 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 F2Z2F3 143 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 M0R1W7 72 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 TSPAN15O95858 294 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 PRH1P02810 166 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 CEACAM3P40198 252 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 HOXA1P49639 335 aaPredicted RBP4.49□□□□□ -1.69
SCLT1-207ENST00000506233 ZFP82Q8N141 532 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 FRZBQ92765 325 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 PRSS22Q9GZN4 317 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 C19orf71A6NCJ1 209 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 M0QXV9 152 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 PYYP10082 97 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 PMCHP20382 165 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 NPY1RP25929 384 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 TTC9CQ8N5M4 171 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 C10orf105Q8TEF2 133 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 ZNF586Q9NXT0 402 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 TSSC4Q9Y5U2 329 aaPredicted RBP4.49□□□□□ -1.69
SCLT1-207ENST00000506233 GCHFRP30047 84 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 GPX4P36969 197 aaPredicted RBP4.49□□□□□ -1.69
SCLT1-207ENST00000506233 RPL8P62917 257 aaKnown RBP4.49□□□□□ -1.69
SCLT1-207ENST00000506233 CATR1Q13166 79 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 COA6Q5JTJ3 125 aaKnown RBP4.49□□□□□ -1.69
SCLT1-207ENST00000506233 ACTL10Q5JWF8 245 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 NPVFQ9HCQ7 196 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 DOK5Q9P104 306 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 POLQO75417 2590 aa4.49□□□□□ -1.69
SCLT1-207ENST00000506233 TMEM250H0YL14 139 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 PRB4P10163 310 aaPredicted RBP4.48□□□□□ -1.69
SCLT1-207ENST00000506233 USF2Q15853 346 aaPredicted RBP4.48□□□□□ -1.69
SCLT1-207ENST00000506233 TNXAQ16473 311 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 WASHC3Q9Y3C0 194 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 STARD9Q9P2P6 4700 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 BORCS7-ASMTA0A0B4J1R7 106 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 TCRBV4S1A1TA0A5B7 111 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 OXTP01178 125 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 OR10J4P0C629 311 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 IGHV4-38-2P0DP08 117 aa4.48□□□□□ -1.69
SCLT1-207ENST00000506233 PPP1R27Q86WC6 154 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms