RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 IGHV1-24A0A0C4DH33 117 aa12.7□□□□□ -0.38
DDX41-205ENST00000505081 ZNF785A8K8V0 405 aa12.7□□□□□ -0.38
DDX41-205ENST00000505081 LY6HO94772 140 aa12.7□□□□□ -0.38
DDX41-205ENST00000505081 KLHDC1Q8N7A1 406 aa12.7□□□□□ -0.38
DDX41-205ENST00000505081 TIMM8BQ9Y5J9 83 aaPredicted RBP12.7□□□□□ -0.38
DDX41-205ENST00000505081 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
DDX41-205ENST00000505081 I3L2K1 104 aa12.7□□□□□ -0.38
DDX41-205ENST00000505081 GAGE1Q13065 139 aa12.7□□□□□ -0.38
DDX41-205ENST00000505081 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
DDX41-205ENST00000505081 LINC01560Q8TB33 94 aa12.7□□□□□ -0.38
DDX41-205ENST00000505081 RPEQ96AT9 228 aa12.7□□□□□ -0.38
DDX41-205ENST00000505081 IGKV1-17P01599 117 aa12.69□□□□□ -0.38
DDX41-205ENST00000505081 PLP1P60201 277 aa12.69□□□□□ -0.38
DDX41-205ENST00000505081 RBPMS2Q6ZRY4 209 aaKnown RBP12.69□□□□□ -0.38
DDX41-205ENST00000505081 BCL6BQ8N143 479 aaPredicted RBP12.69□□□□□ -0.38
DDX41-205ENST00000505081 RASL11BQ9BPW5 248 aa12.69□□□□□ -0.38
DDX41-205ENST00000505081 ZNF492Q9P255 531 aa12.69□□□□□ -0.38
DDX41-205ENST00000505081 ANKHD1Q8IWZ3 2542 aaKnown RBP12.69□□□□□ -0.38
DDX41-205ENST00000505081 SIAH2O43255 324 aa12.69□□□□□ -0.38
DDX41-205ENST00000505081 UNQ5815/PRO19632Q6UWF5 114 aa12.69□□□□□ -0.38
DDX41-205ENST00000505081 ZFP30Q9Y2G7 519 aa12.69□□□□□ -0.38
DDX41-205ENST00000505081 MUC6Q6W4X9 2439 aa12.69□□□□□ -0.38
DDX41-205ENST00000505081 PPIAL4CA0A0B4J2A2 164 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 CNIH1O95406 144 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 CSN3P07498 182 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 PPIAL4GP0DN37 164 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 FBLN7Q53RD9 439 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 SMIM12Q96EX1 92 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 OTORQ9NRC9 128 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 H0Y8G0 127 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 APOBEC3AP31941 199 aaPredicted RBP12.68□□□□□ -0.38
DDX41-205ENST00000505081 ZC2HC1AQ96GY0 325 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 TMEM70Q9BUB7 260 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 A0A1W2PRD5 423 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 A0A1W2PRF3 423 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 A0A1W2PRM7 423 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 hDV102S1A0JD36 115 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 CHEK1O14757 476 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 GRNP28799 593 aaKnown RBP12.68□□□□□ -0.38
DDX41-205ENST00000505081 ONECUT1Q9UBC0 465 aa12.68□□□□□ -0.38
DDX41-205ENST00000505081 OR4C46A6NHA9 309 aa12.67□□□□□ -0.38
DDX41-205ENST00000505081 OVOL3O00110 214 aa12.67□□□□□ -0.38
DDX41-205ENST00000505081 TIMM23O14925 209 aa12.67□□□□□ -0.38
DDX41-205ENST00000505081 TCF21O43680 179 aa12.67□□□□□ -0.38
DDX41-205ENST00000505081 HILPDAQ9Y5L2 63 aa12.67□□□□□ -0.38
DDX41-205ENST00000505081 LOC102724200A0A096LPH7 203 aaPredicted RBP12.67□□□□□ -0.38
DDX41-205ENST00000505081 TCF15Q12870 199 aa12.67□□□□□ -0.38
DDX41-205ENST00000505081 CT83Q5H943 113 aa12.67□□□□□ -0.38
DDX41-205ENST00000505081 K7EIM0 57 aa12.66□□□□□ -0.38
DDX41-205ENST00000505081 MED13LQ71F56 2210 aa12.66□□□□□ -0.38
DDX41-205ENST00000505081 NPIPB6E9PJ23 425 aa12.66□□□□□ -0.38
DDX41-205ENST00000505081 M0R3E3 92 aa12.66□□□□□ -0.38
DDX41-205ENST00000505081 APOHP02749 345 aaPredicted RBP12.66□□□□□ -0.38
DDX41-205ENST00000505081 ARMS2P0C7Q2 107 aa12.66□□□□□ -0.38
DDX41-205ENST00000505081 OR4F17Q8NGA8 305 aa12.66□□□□□ -0.38
DDX41-205ENST00000505081 TNFRSF14Q92956 283 aa12.66□□□□□ -0.38
DDX41-205ENST00000505081 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
DDX41-205ENST00000505081 HRNRQ86YZ3 2850 aaPredicted RBP12.66□□□□□ -0.38
DDX41-205ENST00000505081 LEPROTL1O95214 131 aa12.65□□□□□ -0.38
DDX41-205ENST00000505081 CD3EP07766 207 aa12.65□□□□□ -0.38
DDX41-205ENST00000505081 LINC00614P0C842 121 aa12.65□□□□□ -0.38
DDX41-205ENST00000505081 RBPJQ06330 500 aa12.65□□□□□ -0.38
DDX41-205ENST00000505081 PMCHL2Q9BQD1 86 aa12.65□□□□□ -0.38
DDX41-205ENST00000505081 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
DDX41-205ENST00000505081 B9A039 149 aa12.65□□□□□ -0.39
DDX41-205ENST00000505081 SYS1-DBNDD2H3BUS1 97 aa12.65□□□□□ -0.39
DDX41-205ENST00000505081 TMEM14CQ9P0S9 112 aa12.65□□□□□ -0.39
DDX41-205ENST00000505081 TRBV19A0A075B6N1 114 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 IL4P05112 153 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 ARF6P62330 175 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 KLRD1Q13241 179 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 TMUB1Q9BVT8 246 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 GFRA4Q9GZZ7 299 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 FCGR2BP31994 310 aaPredicted RBP12.64□□□□□ -0.39
DDX41-205ENST00000505081 CRIP1P50238 77 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 ERASQ7Z444 233 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 MUC15Q8N387 334 aa12.64□□□□□ -0.39
DDX41-205ENST00000505081 MRPS16Q9Y3D3 137 aaKnown RBP12.64□□□□□ -0.39
DDX41-205ENST00000505081 PTPRQQ9UMZ3 2332 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 FAM90A27PA6NNH2 459 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 LY6LH3BQJ8 138 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 SIGLEC15Q6ZMC9 328 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 SHANK2-AS3Q9BTD1 123 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 SOX21Q9Y651 276 aaPredicted RBP12.63□□□□□ -0.39
DDX41-205ENST00000505081 HOXB4P17483 251 aaPredicted RBP12.63□□□□□ -0.39
DDX41-205ENST00000505081 HTR1DP28221 377 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 PAX2Q02962 417 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 C8orf49Q96NF6 230 aa12.63□□□□□ -0.39
DDX41-205ENST00000505081 RBM14Q96PK6 669 aaKnown RBP12.63□□□□□ -0.39
DDX41-205ENST00000505081 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.62□□□□□ -0.39
DDX41-205ENST00000505081 HLA-DRB1P01911 266 aa12.62□□□□□ -0.39
DDX41-205ENST00000505081 BPIFA4PQ86YQ2 179 aa12.62□□□□□ -0.39
DDX41-205ENST00000505081 CHCHD1Q96BP2 118 aaKnown RBP12.62□□□□□ -0.39
DDX41-205ENST00000505081 PSG8Q9UQ74 426 aa12.62□□□□□ -0.39
DDX41-205ENST00000505081 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
DDX41-205ENST00000505081 TMSB15BA0A087X1C1 80 aa12.62□□□□□ -0.39
DDX41-205ENST00000505081 H3BRN7 92 aa12.62□□□□□ -0.39
DDX41-205ENST00000505081 HAX1O00165 279 aa12.62□□□□□ -0.39
DDX41-205ENST00000505081 ZNF672Q499Z4 452 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms