RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 ZNF502Q8TBZ5 544 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 MBD6Q96DN6 1003 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 GRAMD2BQ96HH9 432 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 C12orf57Q99622 126 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 MLST8Q9BVC4 326 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 TMUB1Q9BVT8 246 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 AURKAIP1Q9NWT8 199 aaPredicted RBP7.68□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF586Q9NXT0 402 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 ZFP30Q9Y2G7 519 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 TRAPPC1Q9Y5R8 145 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 RELNP78509 3460 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 IGHV4-30-2A0A087WSY4 118 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 ATP6V0E1O15342 81 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
COL1A1-210ENST00000504289 OR2J3O76001 311 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 FBLN7Q53RD9 439 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 C19orf54Q5BKX5 351 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 KLF17Q5JT82 389 aaPredicted RBP7.67□□□□□ -1.18
COL1A1-210ENST00000504289 FAM209BQ5JX69 171 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 C1orf194Q5T5A4 169 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 LRRC75A-AS1Q8N1F1 130 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 TMEM75Q8N9X5 138 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 OR4B1Q8NGF8 309 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 PIFOQ8TCI5 191 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 WIPF2Q8TF74 440 aaPredicted RBP7.67□□□□□ -1.18
COL1A1-210ENST00000504289 BLNKQ8WV28 456 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 EEF1AKMT3Q96AZ1 226 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 HSPB9Q9BQS6 159 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 GFRA4Q9GZZ7 299 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 GSX1Q9H4S2 264 aaPredicted RBP7.67□□□□□ -1.18
COL1A1-210ENST00000504289 BEX4Q9NWD9 120 aaPredicted RBP7.67□□□□□ -1.18
COL1A1-210ENST00000504289 RABAC1Q9UI14 185 aa7.67□□□□□ -1.18
COL1A1-210ENST00000504289 SOX21Q9Y651 276 aaPredicted RBP7.67□□□□□ -1.18
COL1A1-210ENST00000504289 IZUMO1RA6ND01 250 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 PCP4L1A6NKN8 68 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 MGST1P10620 155 aaKnown RBP7.66□□□□□ -1.18
COL1A1-210ENST00000504289 RHOGP84095 191 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 RELQ04864 619 aaPredicted RBP7.66□□□□□ -1.18
COL1A1-210ENST00000504289 OR5I1Q13606 314 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 CLEC12BQ2HXU8 276 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 ATP5L2Q7Z4Y8 100 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 LINC01356Q8N9X3 169 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 TSKUQ8WUA8 353 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF414Q96IQ9 312 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 PRSS22Q9GZN4 317 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 C7orf69Q9H7B7 122 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 CLEC5AQ9NY25 188 aa7.66□□□□□ -1.18
COL1A1-210ENST00000504289 TRAV41A0A0B4J266 112 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 TRAV40A0A0B4J280 105 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 XKRY2A2RUG3 117 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 A6NDX4 124 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF705GA8MUZ8 300 aaPredicted RBP7.65□□□□□ -1.18
COL1A1-210ENST00000504289 A8MWL6 223 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 SLC17A3O00476 420 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 UBR5O95071 2799 aaPredicted RBP7.65□□□□□ -1.18
COL1A1-210ENST00000504289 IGHG2P01859 326 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 HLA-DQA1P01909 254 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 HNF1AP20823 631 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 LOXL1Q08397 574 aaPredicted RBP7.65□□□□□ -1.18
COL1A1-210ENST00000504289 USF2Q15853 346 aaPredicted RBP7.65□□□□□ -1.18
COL1A1-210ENST00000504289 C15orf32Q32M92 178 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 SIGLEC15Q6ZMC9 328 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 COX8CQ7Z4L0 72 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 USMG5Q96IX5 58 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 SPG11Q96JI7 2443 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 PACRGQ96M98 296 aaPredicted RBP7.65□□□□□ -1.18
COL1A1-210ENST00000504289 NAT8BQ9UHF3 227 aa7.65□□□□□ -1.18
COL1A1-210ENST00000504289 ABCA2Q9BZC7 2435 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 A0A087X0K7 114 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 C19orf71A6NCJ1 209 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 NPIPB6E9PJ23 425 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 AMY1AP04745 511 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 RNF224P0DH78 156 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 ADMP35318 185 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 CSN1S1P47710 185 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 ATP5G2Q06055 141 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 ECSCRQ19T08 205 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 LEMD1Q68G75 181 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 Q86TA4 180 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 OR8I2Q8N0Y5 310 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 DAZAP1Q96EP5 407 aaKnown RBP7.64□□□□□ -1.19
COL1A1-210ENST00000504289 LINC00479Q96M42 142 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 RNASE7Q9H1E1 156 aaKnown RBP7.64□□□□□ -1.19
COL1A1-210ENST00000504289 HIF1ANQ9NWT6 349 aa7.64□□□□□ -1.19
COL1A1-210ENST00000504289 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.63□□□□□ -1.19
COL1A1-210ENST00000504289 A0A096LNT2 108 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 TRAV34A0A0B4J273 112 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 TMEM89A2RUT3 159 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 OR2T8A6NH00 312 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 IFITM10A6NMD0 228 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 J3QKU1 62 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 CLEC3BP05452 202 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 ESDP10768 282 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 SSTP61278 116 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 GNG5P63218 68 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 Q0VG73 95 aa7.63□□□□□ -1.19
COL1A1-210ENST00000504289 C16orf54Q6UWD8 224 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms