RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 TM2D2Q9BX73 214 aa4.28□□□□□ -1.72
PTPN20-212ENST00000502254 PEF1Q9UBV8 284 aaKnown RBP4.28□□□□□ -1.72
PTPN20-212ENST00000502254 PUS1Q9Y606 427 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPN20-212ENST00000502254 TNCP24821 2201 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 PLXNB1O43157 2135 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 HIVEP1P15822 2718 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 A0A087WW49 117 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 A0A1B0GUS0 222 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 A0A1W2PPV4 95 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 ZNF320A2RRD8 509 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 UMAD1C9J7I0 102 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 ZNF207O43670 478 aaKnown RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 GGCTO75223 188 aaKnown RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 HYPMO75409 117 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 CDC34P49427 236 aaPredicted RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 RAB5CP51148 216 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 PROK1P58294 105 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 KRTAP10-3P60369 221 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 RELQ04864 619 aaPredicted RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 DEFB136Q30KP8 78 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 FAM78BQ5VT40 261 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 C10orf113Q5VZT2 155 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 SPATA31B1PQ5VZV4 182 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 SPSB3Q6PJ21 355 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 LCN15Q6UWW0 184 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 TOMM20LQ6UXN7 152 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 PATE2Q6UY27 113 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 PRIMA1Q86XR5 153 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 IQCF2Q8IXL9 164 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 RPP25LQ8N5L8 163 aaKnown RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 OR1L4Q8NGR5 311 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 MYOZ3Q8TDC0 251 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 WIPF2Q8TF74 440 aaPredicted RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 DUX3Q96PT4 197 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 ATP6V0BQ99437 205 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 ACTR3CQ9C0K3 210 aaPredicted RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 HRH4Q9H3N8 390 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 SLC25A22Q9H936 323 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 DNAJC4Q9NNZ3 241 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 RPRMQ9NS64 109 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 HIGD1AQ9Y241 93 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 TSSC4Q9Y5U2 329 aaPredicted RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 SONP18583 2426 aaKnown RBP4.27□□□□□ -1.73
PTPN20-212ENST00000502254 NAV3Q8IVL0 2385 aa4.27□□□□□ -1.73
PTPN20-212ENST00000502254 IGHV3OR16-13A0A075B7E8 117 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 IGHV3-49A0A0A0MS15 119 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 IGHV3-74A0A0B4J1X5 117 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 TRAV5A0A0B4J249 113 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 IGHV3-66A0A0C4DH42 116 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 WI2-2373I1.2A0A1W2PRP0 233 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 LINC01619G3V211 115 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 TEX46H3BTG2 121 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 I3L521 148 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 HSPB1P04792 205 aaKnown RBP4.26□□□□□ -1.73
PTPN20-212ENST00000502254 CDX1P47902 265 aaPredicted RBP4.26□□□□□ -1.73
PTPN20-212ENST00000502254 FGF8P55075 233 aaPredicted RBP4.26□□□□□ -1.73
PTPN20-212ENST00000502254 RHOBP62745 196 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 USF2Q15853 346 aaPredicted RBP4.26□□□□□ -1.73
PTPN20-212ENST00000502254 ZNF726P1Q15940 193 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 RPEL1Q2QD12 228 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 KRTAP24-1Q3LI83 254 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 FAM106AQ4KMX7 169 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 PXDC1Q5TGL8 231 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 LEMD1Q68G75 181 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 DPPA3Q6W0C5 159 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 MIR17HGQ75NE6 70 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 SSX7Q7RTT5 188 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 LINC00305Q7Z4B0 112 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 OR11H1Q8NG94 326 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 OR1N2Q8NGR9 330 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 LRRC20Q8TCA0 184 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 GATAD1Q8WUU5 269 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 SFT2D1Q8WV19 159 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 C4orf3Q8WVX3 66 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 TMEM37Q8WXS4 190 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 UHRF2Q96PU4 802 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 PFDN5Q99471 154 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 RNF2Q99496 336 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 RABAC1Q9UI14 185 aa4.26□□□□□ -1.73
PTPN20-212ENST00000502254 FN1P02751 2386 aaKnown RBP4.25□□□□□ -1.73
PTPN20-212ENST00000502254 TLN2Q9Y4G6 2542 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 CTXND1A0A1B0GTU2 59 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 MAP1LC3B2A6NCE7 125 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 SEC14L6B5MCN3 397 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 CCL24O00175 119 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 NDUFA4O00483 81 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 OR7C2O60412 319 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 NMBP08949 121 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 SNRPCP09234 159 aaKnown RBP4.25□□□□□ -1.73
PTPN20-212ENST00000502254 C8orf88P0DMB2 117 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 NPPCP23582 126 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 HOXD3P31249 432 aaPredicted RBP4.25□□□□□ -1.73
PTPN20-212ENST00000502254 SYNJ2BPP57105 145 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 PLP1P60201 277 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 CCL20P78556 96 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 CLLU1Q5K131 121 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 MORN5Q5VZ52 161 aa4.25□□□□□ -1.73
PTPN20-212ENST00000502254 UNQ9165/PRO28630Q6UXU0 137 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms