RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 NGBQ9NPG2 151 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 C1RLQ9NZP8 487 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 C19orf71A6NCJ1 209 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 A8MWL6 223 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 LEPROTL1O95214 131 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 P01737 135 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 APELAP0DMC3 54 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 VMA21Q3ZAQ7 101 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 FAM162BQ5T6X4 162 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 C8orf31Q8N9H6 132 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 CHCHD1Q96BP2 118 aaKnown RBP13.07□□□□□ -0.32
COL6A1-206ENST00000498614 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
COL6A1-206ENST00000498614 NBEAP1P0C6P0 100 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 ZNF138P52744 262 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 SUB1P53999 127 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL6A1-206ENST00000498614 SMIM12Q96EX1 92 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 VKORC1Q9BQB6 163 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 MCRIP2Q9BUT9 160 aaKnown RBP13.06□□□□□ -0.32
COL6A1-206ENST00000498614 RALYQ9UKM9 306 aaKnown RBP13.06□□□□□ -0.32
COL6A1-206ENST00000498614 TAX1BP3O14907 124 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 NUDT3O95989 172 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 LTAP01374 205 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 CDSNQ15517 529 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 MRGPRG-AS1Q2M3A8 158 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 HCP5Q6MZN7 132 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 TMEM133Q9H2Q1 129 aa13.06□□□□□ -0.32
COL6A1-206ENST00000498614 SPTBN1Q01082 2364 aaKnown RBP13.06□□□□□ -0.32
COL6A1-206ENST00000498614 CNTFRP26992 372 aa13.05□□□□□ -0.32
COL6A1-206ENST00000498614 CDKN1BP46527 198 aa13.05□□□□□ -0.32
COL6A1-206ENST00000498614 ANKRD39Q53RE8 183 aa13.05□□□□□ -0.32
COL6A1-206ENST00000498614 STXBP6Q8NFX7 210 aa13.05□□□□□ -0.32
COL6A1-206ENST00000498614 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-206ENST00000498614 APOBEC3AP31941 199 aaPredicted RBP13.05□□□□□ -0.32
COL6A1-206ENST00000498614 MC5RP33032 325 aa13.05□□□□□ -0.32
COL6A1-206ENST00000498614 CT83Q5H943 113 aa13.05□□□□□ -0.32
COL6A1-206ENST00000498614 BVES-AS1Q5T3Y7 98 aa13.05□□□□□ -0.32
COL6A1-206ENST00000498614 ZNF492Q9P255 531 aa13.05□□□□□ -0.32
COL6A1-206ENST00000498614 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
COL6A1-206ENST00000498614 GNLYP22749 145 aa13.04□□□□□ -0.32
COL6A1-206ENST00000498614 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
COL6A1-206ENST00000498614 Q71RC1 249 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-206ENST00000498614 LINC01560Q8TB33 94 aa13.04□□□□□ -0.32
COL6A1-206ENST00000498614 FMC1Q96HJ9 113 aa13.04□□□□□ -0.32
COL6A1-206ENST00000498614 SOX21Q9Y651 276 aaPredicted RBP13.04□□□□□ -0.32
COL6A1-206ENST00000498614 LOC102724200A0A096LPH7 203 aaPredicted RBP13.03□□□□□ -0.32
COL6A1-206ENST00000498614 IGHV3-21A0A0B4J1V1 117 aa13.03□□□□□ -0.32
COL6A1-206ENST00000498614 TCRAP04437 139 aa13.03□□□□□ -0.32
COL6A1-206ENST00000498614 CD3EP07766 207 aa13.03□□□□□ -0.32
COL6A1-206ENST00000498614 GP9P14770 177 aa13.03□□□□□ -0.32
COL6A1-206ENST00000498614 SLC25A34Q6PIV7 304 aa13.03□□□□□ -0.32
COL6A1-206ENST00000498614 C5orf17Q8NAS9 161 aa13.03□□□□□ -0.32
COL6A1-206ENST00000498614 DAZAP1Q96EP5 407 aaKnown RBP13.03□□□□□ -0.32
COL6A1-206ENST00000498614 TMEM191AQ9H0A3 160 aa13.03□□□□□ -0.32
COL6A1-206ENST00000498614 Q9H3A6 140 aa13.03□□□□□ -0.32
COL6A1-206ENST00000498614 TRAV8-1A0A0A6YYK1 113 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 MUC21A0A0G2JKD1 596 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 MUC21A0A140T8X8 626 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 FAM90A27PA6NNH2 459 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 H0Y8G0 127 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 CHEK1O14757 476 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 ADORA2A-AS1P86434 159 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 RNF151Q2KHN1 245 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 MUC21Q5SSG8 566 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 SCRT2Q9NQ03 307 aa13.02□□□□□ -0.32
COL6A1-206ENST00000498614 OR2T8A6NH00 312 aa13.02□□□□□ -0.33
COL6A1-206ENST00000498614 B9A039 149 aa13.02□□□□□ -0.33
COL6A1-206ENST00000498614 CRYGCP07315 174 aa13.02□□□□□ -0.33
COL6A1-206ENST00000498614 LGALS7P47929 136 aa13.02□□□□□ -0.33
COL6A1-206ENST00000498614 RHOGP84095 191 aa13.02□□□□□ -0.33
COL6A1-206ENST00000498614 PMCHL2Q9BQD1 86 aa13.02□□□□□ -0.33
COL6A1-206ENST00000498614 NDFIP1Q9BT67 221 aa13.02□□□□□ -0.33
COL6A1-206ENST00000498614 ZNF462Q96JM2 2506 aa13.02□□□□□ -0.33
COL6A1-206ENST00000498614 CBY3A6NI87 242 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 LIPFP07098 398 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 SAPCD1Q5SSQ6 148 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 CIARTQ8N365 385 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-206ENST00000498614 GFRA4Q9GZZ7 299 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 GSX1Q9H4S2 264 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-206ENST00000498614 HSBP1L1C9JCN9 74 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 GRNP28799 593 aaKnown RBP13.01□□□□□ -0.33
COL6A1-206ENST00000498614 RPL27AP46776 148 aaKnown RBP13.01□□□□□ -0.33
COL6A1-206ENST00000498614 DEFB125Q8N687 156 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 TRGV9Q99603 122 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 TMUB1Q9BVT8 246 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 MAP1LC3CQ9BXW4 147 aa13.01□□□□□ -0.33
COL6A1-206ENST00000498614 FLNCQ14315 2725 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 CHD6Q8TD26 2715 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 APOHP02749 345 aaPredicted RBP13□□□□□ -0.33
COL6A1-206ENST00000498614 COX7A1P24310 79 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 RNF24Q9Y225 148 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 TIMM8BQ9Y5J9 83 aaPredicted RBP13□□□□□ -0.33
COL6A1-206ENST00000498614 MALRD1Q5VYJ5 2156 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 NPIPB6E9PJ23 425 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 OVOL3O00110 214 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 TOX4O94842 621 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 IGLV1-47P01700 117 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 CSN3P07498 182 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 PET117Q6UWS5 81 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 Q86TA4 180 aa13□□□□□ -0.33
COL6A1-206ENST00000498614 TEX45Q8NA69 505 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms