RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 IGF2RP11717 2491 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 CA1P00915 261 aaPredicted RBP9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 CRYGBP07316 175 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 RPL8P62917 257 aaKnown RBP9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 MOB3BQ86TA1 216 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 STPG3Q8N7X2 389 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 TEX45Q8NA69 505 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 MBD6Q96DN6 1003 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 V9GYV3 84 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 TNCP24821 2201 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 MRGPRG-AS1Q2M3A8 158 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 NHLRC2Q8NBF2 726 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 OR11H6Q8NGC7 330 aa9.26□□□□□ -0.93
SNRNP200-208ENST00000497539 PIEZO2Q9H5I5 2752 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 BUB1B-PAK6H3BSN5 160 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 ZNF207O43670 478 aaKnown RBP9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 ZNF253O75346 499 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 RNASE2P10153 161 aaKnown RBP9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 NTF3P20783 257 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 PSG5Q15238 335 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 VMA21Q3ZAQ7 101 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 CENPWQ5EE01 88 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 SERTAD4Q9NUC0 356 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 A0A1W2PS18 150 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 PSMB11A5LHX3 300 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 DIAPH2-AS1Q14236 149 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 LCN12Q6JVE5 192 aa9.25□□□□□ -0.93
SNRNP200-208ENST00000497539 K7EP34 96 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 REG1AP05451 166 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 MGST1P10620 155 aaKnown RBP9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 GNLYP22749 145 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 SRIP30626 198 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 GNG4P50150 75 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 C12orf54Q6X4T0 127 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 ONECUT1Q9UBC0 465 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 A0A1W2PPR1 153 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 CGB1A6NKQ9 187 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 PRR20EP86478 221 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 PRR20CP86479 221 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 PRR20DP86480 221 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 PRR20BP86481 221 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 PRR20AP86496 221 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 Q0VG73 95 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 TEPPQ6URK8 271 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 NDFIP1Q9BT67 221 aa9.24□□□□□ -0.93
SNRNP200-208ENST00000497539 IGHV1-3A0A0C4DH29 117 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 ODF3BA8MYP8 253 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 RHOBP62745 196 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 MLANAQ16655 118 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 MPV17L2Q567V2 206 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 OR5A1Q8NGJ0 315 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 SSBP3Q9BWW4 388 aaPredicted RBP9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 COMMD5Q9GZQ3 224 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 TMEM213A2RRL7 107 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 B5MCH6 92 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 J3QR89 54 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 SCGB2A1O75556 95 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 C3orf79P0CE67 100 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 UQCRFS1P47985 274 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 TMEM136Q6ZRR5 245 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 IGFBPL1Q8WX77 278 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 FAM168AQ92567 244 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 LINC00479Q96M42 142 aa9.23□□□□□ -0.93
SNRNP200-208ENST00000497539 A0A087WX48 190 aa9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 REG1BP48304 166 aa9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 CD69Q07108 199 aa9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 TXNDC17Q9BRA2 123 aa9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 GNB1LQ9BYB4 327 aa9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 CSDC2Q9Y534 153 aaKnown RBP9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 RP1L1Q8IWN7 2480 aaPredicted RBP9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 BMPR1BO00238 502 aa9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 ERHP84090 104 aaKnown RBP9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 PMCHL1Q16048 86 aa9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 SRSF8Q9BRL6 282 aaKnown RBP9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 PCNX1Q96RV3 2341 aa9.22□□□□□ -0.93
SNRNP200-208ENST00000497539 TEX48A0A1B0GUV7 120 aa9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 A0A1W2PPI3 338 aa9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 OVOL3O00110 214 aa9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 PRTN3P24158 256 aa9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 EFNA4P52798 201 aa9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 CX3CL1P78423 397 aa9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 SRSF1Q07955 248 aaKnown RBP eCLIP9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 C19orf24Q9BVV8 132 aa9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 ARL2-SNX15V9GYD0 113 aa9.21□□□□□ -0.93
SNRNP200-208ENST00000497539 LINC00869P0C866 280 aa9.21□□□□□ -0.94
SNRNP200-208ENST00000497539 HCP5Q6MZN7 132 aa9.21□□□□□ -0.94
SNRNP200-208ENST00000497539 NRGNQ92686 78 aa9.21□□□□□ -0.94
SNRNP200-208ENST00000497539 KCNS1Q96KK3 526 aa9.21□□□□□ -0.94
SNRNP200-208ENST00000497539 TP73-AS1Q9UF72 201 aa9.21□□□□□ -0.94
SNRNP200-208ENST00000497539 ANKHD1Q8IWZ3 2542 aaKnown RBP9.21□□□□□ -0.94
SNRNP200-208ENST00000497539 OOSP1A8MZH6 123 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 C9JCJ5 164 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 SUB1P53999 127 aaKnown RBP eCLIP9.2□□□□□ -0.945e-7■■■■■ 33.7
SNRNP200-208ENST00000497539 C19orf35Q6ZS72 473 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 TSKUQ8WUA8 353 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 C11orf52Q96A22 123 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 MUC21A0A0G2JKD1 596 aa9.2□□□□□ -0.94
SNRNP200-208ENST00000497539 MUC21A0A140T8X8 626 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms