RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 BORCS5Q969J3 196 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 MARC2Q969Z3 335 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 EEF1AKMT3Q96AZ1 226 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 SLC25A38Q96DW6 304 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 OR2A7Q96R45 310 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 HSD17B10Q99714 261 aaKnown RBP3.02□□□□□ -1.93
VPS52-222ENST00000495981 GINS4Q9BRT9 223 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 OR51E2Q9H255 320 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 DUSP21Q9H596 190 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 DAZ1Q9NQZ3 744 aaKnown RBP3.02□□□□□ -1.93
VPS52-222ENST00000495981 BET1LQ9NYM9 111 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 TAS2R8Q9NYW2 309 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 V9GY05 133 aa3.02□□□□□ -1.93
VPS52-222ENST00000495981 IGHV3OR16-8A0A075B7F1 116 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 TRBV7-1A0A0A6YYK4 115 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 TRAV1-2A0A0B4J238 106 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 TRAV3A0A0B4J244 114 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 A0A1B0GU03 582 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 K7EIM0 57 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 ZNF701M0R085 212 aaPredicted RBP3.01□□□□□ -1.93
VPS52-222ENST00000495981 RBFOX2O43251 390 aaKnown RBP eCLIP3.01□□□□□ -1.93
VPS52-222ENST00000495981 NDUFS6O75380 124 aaKnown RBP3.01□□□□□ -1.93
VPS52-222ENST00000495981 INAFM2P0DMQ5 153 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 PTHLHP12272 177 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 HIST1H1BP16401 226 aaKnown RBP3.01□□□□□ -1.93
VPS52-222ENST00000495981 CRHBPP24387 322 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 GADD45AP24522 165 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 MAS1LP35410 378 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 NUP62P37198 522 aaPredicted RBP3.01□□□□□ -1.93
VPS52-222ENST00000495981 MAP2K4P45985 399 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 NKX2-5P52952 324 aaPredicted RBP3.01□□□□□ -1.93
VPS52-222ENST00000495981 AQP4P55087 323 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 OXA1LQ15070 435 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 TRAM1Q15629 374 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 HACD4Q5VWC8 232 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 Q8N377 158 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 OR4A5Q8NH83 315 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 LGALS14Q8TCE9 139 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 CD300LFQ8TDQ1 290 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 GPX8Q8TED1 209 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 TCTEX1D2Q8WW35 142 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 OR51M1Q9H341 326 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 RBKSQ9H477 322 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 ACOT13Q9NPJ3 140 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 MRPL27Q9P0M9 148 aaKnown RBP3.01□□□□□ -1.93
VPS52-222ENST00000495981 DHRS4-AS1Q9P1J3 65 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 RAB22AQ9UL26 194 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 KCNIP3Q9Y2W7 256 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 KLK5Q9Y337 293 aaPredicted RBP3.01□□□□□ -1.93
VPS52-222ENST00000495981 PRELID3BQ9Y3B1 194 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 UFC1Q9Y3C8 167 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 TNFRSF18Q9Y5U5 241 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 TNXBP22105 4242 aa3.01□□□□□ -1.93
VPS52-222ENST00000495981 DNAH8Q96JB1 4490 aa3□□□□□ -1.93
VPS52-222ENST00000495981 OR2T8A6NH00 312 aa3□□□□□ -1.93
VPS52-222ENST00000495981 OR4C46A6NHA9 309 aa3□□□□□ -1.93
VPS52-222ENST00000495981 LINC00587B1AMM8 73 aa3□□□□□ -1.93
VPS52-222ENST00000495981 NDUFA4O00483 81 aa3□□□□□ -1.93
VPS52-222ENST00000495981 ZNF207O43670 478 aaKnown RBP3□□□□□ -1.93
VPS52-222ENST00000495981 ZNF253O75346 499 aa3□□□□□ -1.93
VPS52-222ENST00000495981 PPYP01298 95 aa3□□□□□ -1.93
VPS52-222ENST00000495981 GIG44P09565 113 aaPredicted RBP3□□□□□ -1.93
VPS52-222ENST00000495981 RBMY1CP0DJD4 496 aa3□□□□□ -1.93
VPS52-222ENST00000495981 GATA1P15976 413 aaPredicted RBP3□□□□□ -1.93
VPS52-222ENST00000495981 RPL5P46777 297 aaKnown RBP3□□□□□ -1.93
VPS52-222ENST00000495981 RPL29P47914 159 aaKnown RBP3□□□□□ -1.93
VPS52-222ENST00000495981 TAS2R31P59538 309 aa3□□□□□ -1.93
VPS52-222ENST00000495981 FLI1Q01543 452 aaPredicted RBP3□□□□□ -1.93
VPS52-222ENST00000495981 OR5I1Q13606 314 aa3□□□□□ -1.93
VPS52-222ENST00000495981 LINC00299Q6ZSB3 139 aa3□□□□□ -1.93
VPS52-222ENST00000495981 SSX9Q7RTT3 188 aa3□□□□□ -1.93
VPS52-222ENST00000495981 APRG1Q8IVJ8 170 aa3□□□□□ -1.93
VPS52-222ENST00000495981 SPAG16Q8N0X2 631 aa3□□□□□ -1.93
VPS52-222ENST00000495981 FAM24BQ8N5W8 94 aa3□□□□□ -1.93
VPS52-222ENST00000495981 OR10W1Q8NGF6 305 aa3□□□□□ -1.93
VPS52-222ENST00000495981 VN1R17PQ8TDU5 208 aa3□□□□□ -1.93
VPS52-222ENST00000495981 OR10C1Q96KK4 312 aa3□□□□□ -1.93
VPS52-222ENST00000495981 MGLLQ99685 303 aa3□□□□□ -1.93
VPS52-222ENST00000495981 SEC22CQ9BRL7 303 aa3□□□□□ -1.93
VPS52-222ENST00000495981 FXYD6Q9H0Q3 95 aa3□□□□□ -1.93
VPS52-222ENST00000495981 COMMD9Q9P000 198 aa3□□□□□ -1.93
VPS52-222ENST00000495981 ANXA10Q9UJ72 324 aa3□□□□□ -1.93
VPS52-222ENST00000495981 ANAPC10Q9UM13 185 aa3□□□□□ -1.93
VPS52-222ENST00000495981 RBM7Q9Y580 266 aaKnown RBP3□□□□□ -1.93
VPS52-222ENST00000495981 F11RQ9Y624 299 aaKnown RBP3□□□□□ -1.93
VPS52-222ENST00000495981 NACAE9PAV3 2078 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 TRAV9-2A0A087WT02 112 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 TRDV1A0A1B0GX56 115 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 SMCO3A2RU48 225 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 RAB19A4D1S5 217 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 FAM25AB3EWG3 89 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 FAM25CB3EWG5 89 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 FAM25GB3EWG6 89 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 J3QRK9 145 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 M0R2N4 97 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 SULT1C2O00338 296 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 UPK2O00526 184 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 DEFB4AO15263 64 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 CCNKO75909 580 aa2.99□□□□□ -1.93
VPS52-222ENST00000495981 SLC22A5O76082 557 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms