RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 A0A087WTM6 91 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 TEX13DA0A0J9YY54 714 aaPredicted RBP9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 ZNF98A6NK75 572 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 CD3DP04234 171 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 SULT1A3P0DMM9 295 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 SULT1A4P0DMN0 295 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 TGFBR1P36897 503 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 DTD1Q8TEA8 209 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 SLC25A39Q9BZJ4 359 aaPredicted RBP9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 NAA60Q9H7X0 242 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 SLC25A22Q9H936 323 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 HSPB7Q9UBY9 170 aa9.74□□□□□ -0.85
PRPF40A-211ENST00000493468 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 H7BYZ3 331 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 TNFAIP8O95379 198 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 S100A7P31151 101 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 OR2F1Q13607 317 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 MEF2DQ14814 521 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 TMEM268Q5VZI3 342 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 RNF182Q8N6D2 247 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 THAP8Q8NA92 274 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 ZNF738Q8NE65 137 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 MARCH1Q8TCQ1 289 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 C20orf144Q9BQM9 153 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 TMEM56-RWDD3S4R434 201 aa9.73□□□□□ -0.85
PRPF40A-211ENST00000493468 IGKV1OR2-108A0A075B7D4 117 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 A0A096LPF7 62 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 DNAH10OSP0CZ25 163 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 HTN1P15515 57 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 GCSHP23434 173 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 CDKN1BP46527 198 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 GGNBP1Q5YKI7 109 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 OR8A1Q8NGG7 326 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 IL22RA2Q969J5 263 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 TMEM70Q9BUB7 260 aa9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 C14orf166Q9Y224 244 aaKnown RBP9.72□□□□□ -0.85
PRPF40A-211ENST00000493468 RLN2P04090 185 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 RHOBP62745 196 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 HIST1H1AQ02539 215 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 SURF2Q15527 256 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 GPR107Q5VW38 600 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 IGFL4Q6B9Z1 124 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 OR4D10Q8NGI6 311 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 RTBDNQ9BSG5 229 aaPredicted RBP9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 RBKSQ9H477 322 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 PPP1R14DQ9NXH3 145 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 COMMD3Q9UBI1 195 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 MTFP1Q9UDX5 166 aa9.71□□□□□ -0.86
PRPF40A-211ENST00000493468 GAGE12BA1L429 117 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 CRYM-AS1A6NIL9 109 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 GAGE7O76087 117 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 GAGE12FP0CL80 117 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 GAGE12GP0CL81 117 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 GAGE12IP0CL82 117 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 CCR6P51684 374 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 NEDD8Q15843 81 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 SCGB2B2Q4G0G5 96 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
PRPF40A-211ENST00000493468 NXPH4O95158 308 aa9.69□□□□□ -0.86
PRPF40A-211ENST00000493468 SMCO1Q147U7 214 aa9.69□□□□□ -0.86
PRPF40A-211ENST00000493468 CCDC28AQ8IWP9 274 aa9.69□□□□□ -0.86
PRPF40A-211ENST00000493468 TMEM229BQ8NBD8 167 aa9.69□□□□□ -0.86
PRPF40A-211ENST00000493468 SYT8Q8NBV8 401 aa9.69□□□□□ -0.86
PRPF40A-211ENST00000493468 OR52I2Q8NH67 350 aa9.69□□□□□ -0.86
PRPF40A-211ENST00000493468 TMPRSS5Q9H3S3 457 aa9.69□□□□□ -0.86
PRPF40A-211ENST00000493468 DNAH8Q96JB1 4490 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 SNURFLB1AK76 121 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 ANKRD65E5RJM6 399 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 RAB3DO95716 219 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 CXCL3P19876 107 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 TAS2R19P59542 299 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 BPIFCQ8NFQ6 507 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 TMEM147Q9BVK8 224 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 TNFRSF18Q9Y5U5 241 aa9.68□□□□□ -0.86
PRPF40A-211ENST00000493468 A0A087X0K7 114 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 H3BRN7 92 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 K7EP13 123 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 HPGDSO60760 199 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 RPL7P18124 248 aaKnown RBP9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 ORM2P19652 201 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 RAB11AP62491 216 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 FGL1Q08830 312 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 DAZ2Q13117 558 aaKnown RBP9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 PSG3Q16557 428 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 STEAP1BQ6NZ63 245 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 TMED4Q7Z7H5 227 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 OR1S1Q8NH92 325 aa9.67□□□□□ -0.86
PRPF40A-211ENST00000493468 TRAV9-2A0A087WT02 112 aa9.66□□□□□ -0.86
PRPF40A-211ENST00000493468 A0A0B4J2A0 478 aa9.66□□□□□ -0.86
PRPF40A-211ENST00000493468 HAMPP81172 84 aa9.66□□□□□ -0.86
PRPF40A-211ENST00000493468 SHANK2-AS3Q9BTD1 123 aa9.66□□□□□ -0.86
PRPF40A-211ENST00000493468 Q9H521 79 aa9.66□□□□□ -0.86
PRPF40A-211ENST00000493468 SHPKQ9UHJ6 478 aa9.66□□□□□ -0.86
PRPF40A-211ENST00000493468 GPR132Q9UNW8 380 aa9.66□□□□□ -0.86
PRPF40A-211ENST00000493468 PRSS46E5RG02 174 aa9.65□□□□□ -0.86
PRPF40A-211ENST00000493468 PLA2G1BP04054 148 aaKnown RBP9.65□□□□□ -0.86
PRPF40A-211ENST00000493468 AKR1C4P17516 323 aa9.65□□□□□ -0.86
PRPF40A-211ENST00000493468 LSM3P62310 102 aaKnown RBP9.65□□□□□ -0.86
PRPF40A-211ENST00000493468 GFI1BQ5VTD9 330 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms