RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PRSS27Q9BQR3 290 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 HRASLSQ9HDD0 168 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 WASHC3Q9Y3C0 194 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 MAP1AP78559 2803 aaPredicted RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 SPENQ96T58 3664 aaKnown RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 VPS13AQ96RL7 3174 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 PLECQ15149 4684 aaKnown RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 PRRC2CQ9Y520 2896 aaKnown RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 A0A1B0GV50 99 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 M0R129 80 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 TGOLN2O43493 480 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 RPL12P30050 165 aaKnown RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 SRP9P49458 86 aaKnown RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 TCL1AP56279 114 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 PKIAP61925 76 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 MESTQ5EB52 335 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 BCL2L15Q5TBC7 163 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 ZFAND6Q6FIF0 208 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 ATP5L2Q7Z4Y8 100 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 CLDND2Q8NHS1 167 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 PTH2Q96A98 100 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 CCDC32Q9BV29 185 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 OR51I2Q9H344 312 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 TXNIPQ9H3M7 391 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 TMEM38BQ9NVV0 291 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 SMPXQ9UHP9 88 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 COQ4Q9Y3A0 265 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 NIPBLQ6KC79 2804 aaeCLIP1.91□□□□□ -2.1
SNX13-209ENST00000492626 MEIKINA0A087WXM9 373 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 IGKV1-6A0A0C4DH72 117 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 TMEM218A2RU14 115 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 IZUMO1RA6ND01 250 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 OR5H14A6NHG9 310 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 SERPINE1P05121 402 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 SULT1A3P0DMM9 295 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 SULT1A4P0DMN0 295 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 FKBP2P26885 142 aaKnown RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 ATP6V0CP27449 155 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 KRTAP10-3P60369 221 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 TRMT12Q53H54 448 aaKnown RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 DEFB121Q5J5C9 76 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 Q5W150 140 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 Q6P435 159 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 HAGHLQ6PII5 290 aaPredicted RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 LYZL2Q7Z4W2 148 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 FAM19A5Q7Z5A7 132 aaPredicted RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 LRRC28Q86X40 367 aaPredicted RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 ASB13Q8WXK3 278 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 CMBLQ96DG6 245 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 CCDC88CQ9P219 2028 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 SCP2D1Q9UJQ7 156 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 VPREB3Q9UKI3 123 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 A6NED7 52 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 ZNF207O43670 478 aaKnown RBP1.91□□□□□ -2.1
SNX13-209ENST00000492626 DEDDO75618 318 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 CMPK1P30085 196 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 PSMB3P49720 205 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 CRYBA4P53673 196 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 INSL4Q14641 139 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 SMCO1Q147U7 214 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 HIST3H2BBQ8N257 126 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 RPRMLQ8N4K4 120 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 LINC00337Q8N6G1 96 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 OR10D4PQ8NGN7 298 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 SLC35G5Q96KT7 338 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 CCDC90BQ9GZT6 254 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 SLC35A3Q9Y2D2 325 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 ICOSQ9Y6W8 199 aa1.91□□□□□ -2.1
SNX13-209ENST00000492626 IGLV2-18A0A075B6J9 118 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 A6NIN4 97 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 MCRIP1C9JLW8 97 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 IFNA7P01567 189 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 HSD11B1P28845 292 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 CTBP2P56545 445 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 AP3S2P59780 193 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 RSU1Q15404 277 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 ACSM3Q53FZ2 586 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 CD200R1LQ6Q8B3 271 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 OR2M3Q8NG83 312 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 Q8WTZ3 238 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 IMP4Q96G21 291 aaKnown RBP1.9□□□□□ -2.1
SNX13-209ENST00000492626 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 BPESC1Q9GZL8 116 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 ABCG5Q9H222 651 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 CARHSP1Q9Y2V2 147 aaKnown RBP1.9□□□□□ -2.1
SNX13-209ENST00000492626 ABCA4P78363 2273 aa1.9□□□□□ -2.1
SNX13-209ENST00000492626 LAMA1P25391 3075 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 DHRS12A0PJE2 317 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 C1orf196B1AJZ1 125 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 M0R233 179 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 ZNF140P52738 457 aaPredicted RBP1.9□□□□□ -2.11
SNX13-209ENST00000492626 MMDQ15546 238 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 C4orf26Q17RF5 130 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 ZIC4Q8N9L1 334 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 OR10D3Q8NH80 312 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 PPP3R2Q96LZ3 170 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 GTSF1LQ9H1H1 148 aa1.9□□□□□ -2.11
SNX13-209ENST00000492626 GSKIPQ9P0R6 139 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms