RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RNF2Q99496 336 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 CITED1Q99966 193 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 NAT8BQ9UHF3 227 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 SLC45A2Q9UMX9 530 aa7.4□□□□□ -1.22
BRCA1-219ENST00000491747 SAA2-SAA4A0A096LPE2 208 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 FNDC10F2Z333 226 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 GPX1P07203 203 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 LINC00614P0C842 121 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 FAM106CPP0CH98 169 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 SAA2P0DJI9 122 aaPredicted RBP7.4□□□□□ -1.23
BRCA1-219ENST00000491747 CX3CL1P78423 397 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 EBI3Q14213 229 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 TIGITQ495A1 244 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 RPL39P5Q59GN2 51 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 CENPWQ5EE01 88 aa7.4□□□□□ -1.23
BRCA1-219ENST00000491747 TRAV3A0A0B4J244 114 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 TMEM11P17152 192 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 KRTDAPP60985 99 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 HSPE1P61604 102 aaKnown RBP7.39□□□□□ -1.23
BRCA1-219ENST00000491747 PRR20EP86478 221 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 PRR20CP86479 221 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 PRR20DP86480 221 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 PRR20BP86481 221 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 PRR20AP86496 221 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 HES1Q14469 280 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 PSG5Q15238 335 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 COL5A1-AS1Q5SY13 56 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 SPATA31B1PQ5VZV4 182 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 ZNF833PQ6ZTB9 187 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 Q8N6K4 173 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 OR2T6Q8NHC8 308 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 MRPL20Q9BYC9 149 aaKnown RBP7.39□□□□□ -1.23
BRCA1-219ENST00000491747 PRSS22Q9GZN4 317 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 GNB4Q9HAV0 340 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 OSTCQ9NRP0 149 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 FOXA2Q9Y261 457 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-219ENST00000491747 DIRC3C9JPN6 131 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 OR5G3P0C626 314 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 AMTP48728 403 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 SUMO1P63165 101 aaKnown RBP7.39□□□□□ -1.23
BRCA1-219ENST00000491747 OR5I1Q13606 314 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 RTL8BQ17RB0 113 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 PQLC2Q6ZP29 291 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 RITA1Q96K30 269 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 KCNS1Q96KK3 526 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 NABP2Q9BQ15 211 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 TMEM14BQ9NUH8 114 aa7.39□□□□□ -1.23
BRCA1-219ENST00000491747 F2Z2F3 143 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 ISLRO14498 428 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 HLA-DQA1P01909 254 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 CRYBB3P26998 211 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 TAS2R45P59539 299 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 BATFQ16520 125 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 KLHDC1Q8N7A1 406 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 C5orf56Q8N8D9 126 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 WIPF2Q8TF74 440 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-219ENST00000491747 DDB2Q92466 427 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 FAM103A1Q9BTL3 118 aaKnown RBP7.38□□□□□ -1.23
BRCA1-219ENST00000491747 PLEKHA3Q9HB20 300 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 TECRQ9NZ01 308 aaKnown RBP7.38□□□□□ -1.23
BRCA1-219ENST00000491747 FBXL7Q9UJT9 491 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 ITGB1BP1O14713 200 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 ZNF253O75346 499 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 ACTL6BO94805 426 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 CA2P00918 260 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 NPSP0C0P6 89 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 RELQ04864 619 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-219ENST00000491747 OR4A47Q6IF82 309 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 MIR17HGQ75NE6 70 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 C11orf44Q8N8P7 122 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-219ENST00000491747 WNT10AQ9GZT5 417 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 NRN1Q9NPD7 142 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 MOB4Q9Y3A3 225 aa7.38□□□□□ -1.23
BRCA1-219ENST00000491747 TRRAPQ9Y4A5 3859 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 TET2Q6N021 2002 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-219ENST00000491747 LINC01548A6NM66 108 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 OR7C2O60412 319 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 CT45A6P0DMU7 189 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 CT45A5P0DMU8 189 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 CT45A7P0DMV0 189 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 CNTFRP26992 372 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 IBA57Q5T440 356 aaKnown RBP7.37□□□□□ -1.23
BRCA1-219ENST00000491747 TMEM136Q6ZRR5 245 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 Q8N9W7 124 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 ADTRPQ96IZ2 230 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 SLC35E1Q96K37 410 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 UQCR10Q9UDW1 63 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 PKD1L1Q8TDX9 2849 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 CMYA5Q8N3K9 4069 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 SPINK4O60575 86 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 ZNF324O75467 553 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-219ENST00000491747 MOSP00540 346 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 REG1AP05451 166 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 FRMD6-AS1P0C7T7 363 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 LINC00869P0C866 280 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 SPATA45Q537H7 98 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 C10orf99Q6UWK7 81 aa7.37□□□□□ -1.23
BRCA1-219ENST00000491747 RNASE7Q9H1E1 156 aaKnown RBP7.37□□□□□ -1.23
BRCA1-219ENST00000491747 PRNDQ9UKY0 176 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms